Chryseobacterium sp. PMSZPI: ACL0VS_15830
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Entry
ACL0VS_15830 CDS
T11402
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chrr Chryseobacterium sp. PMSZPI
Pathway
chrr03030
DNA replication
chrr03430
Mismatch repair
chrr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACL0VS_15830 (dnaE)
03430 Mismatch repair
ACL0VS_15830 (dnaE)
03440 Homologous recombination
ACL0VS_15830 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrr03032
]
ACL0VS_15830 (dnaE)
03400 DNA repair and recombination proteins [BR:
chrr03400
]
ACL0VS_15830 (dnaE)
Enzymes [BR:
chrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACL0VS_15830 (dnaE)
DNA replication proteins [BR:
chrr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACL0VS_15830 (dnaE)
DNA repair and recombination proteins [BR:
chrr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACL0VS_15830 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DUF2857
Motif
Other DBs
NCBI-ProteinID:
XNN37383
LinkDB
All DBs
Position
3666530..3671191
Genome browser
AA seq
1553 aa
AA seq
DB search
MYLIFDTETTGLPKNFNAPLSDSDNWPRMVQIAWQVHDDDGKLIENQDYIIKPEGYDIPF
NAARIHGITTKIANEEGRDLQEILEEFSKVLEKIRVVSGHNVEFDYNIVGAEFYRKNIKD
NLQEKPRADTMILGTDYCQLGGGRGGRFKPPKLEELYEKLYGNKFDEAHNAAADVNATAQ
VFFEMMRIGVVPAEVLKISEDQLNYFKSLYPDPIKPFGIIIRRQVADFHNKKKQQDFGSI
DEIDLGKYFNFDNHSVFSTLTATTSINDLIKKASEENFPAVGMVDLGNMMGAFKFVSAVE
GANGDRAKKYKEYLAKKQEAEENGTDFNEEEPVSESLIPVVGCEFYISDRYEQKQFTKDD
PDRRTQVVLLAKDFNGYKNLAKLSSIGFLKGFYFGVPRVSRELIAQYKEGVIALTSGIHG
DIPDAILNTGEQKGEELFKWWKDTFEDDFYVQLQNHKLPEEEHLNEVLLYLADKYNVKIL
AQNETFYTNKDDSNIQDIVSCIKDGEKLSTPVGKGFGKRRGLATGEYYIKNSDEIKEAFL
AYPDAFEAYEEFFAKFKPYTLKRDVLLPKFDIPEEFIHAEDEVDGGKRGEMAYLTHLTYE
GARRRYGENGITADIKERLDFELEVIANTGYPGYFLIVQDFCNEARNMGVWVGPGRGSAA
GSAVAYCIGITNVDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRDRVIKWVIEKYGQSQ
VAQIITYSVLGGKSAIKDAGRVLDVPIPDTNNIAKLIPSTPGMNIAKALAKYDKLKPEEQ
MLVDEMRYVLDSPDDARHGVLASAKKMEGCIRNTGIHACGVIITPEDVSNLVPVTIAAKD
ADILVSQFDNSVAESAGLLKMDFLGLRTLTIIKDALKLVKARYGVDIDPDLIPLDDTKTY
QLFKEGRTVGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGIE
EIVYDLPETEEYLKETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQIDVLNKMY
PKFIEGGRKNNLNEERLEKIWNDWKAFAEYAFNKSHSTCYAFIAYQTAFLKANYPAEYMA
SVMSNNINNTDSITMFMEDCKSMGVDVLGPDVNESQYKFSVNEKGQIRFGLGAIKGIGEG
PSEAITRERENGRFKNIYDFFERILPSQMNKRVAESLVLAGAFDELDAFHRGQYFDIDMA
GRTNLERLIRYGQSFQESKNEMEHSLFADFAEEVQIEQPKLAPCPEWPNMHKLNKEKEII
GFYLSAHPLDEFKYQFQFMQGQLSKKAVLEKDIEEKTDETPVLEQDAQDESVDLTEIVSD
EMSIGDEEVVEEVTKKAEPKGNFLFLNLDEVDAYKEQAFANKQEELFEEKKKDWKTLQKE
RENGGGGKEYTVAGLITEYRVQDGFRSGEKVAFVTLEDYSGSYSFRLGDRDYMRLKEKLE
VQRFVIFKIKFAQVKDGRVFVNVNDVIELQEAFERFAKSISLVMDVMDVRPEDLDFFRTV
LERNKGNQKLKFFIKNIDDDSHIEVQSMKHSVDLNGDLIKEIQLLNKYEFYLN
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttttgacacagaaacaactggtttaccaaaaaatttcaacgccccgctt
tcagattcggataactggccaagaatggttcagattgcatggcaggtacatgatgatgac
gggaaattgattgaaaatcaggattatataataaaacctgaagggtacgatattcccttt
aatgcagctaggattcacgggattacaactaaaattgccaatgaagaaggacgggatctc
caggagattcttgaagaattttcgaaggttctcgagaagataagggtagtttcgggacat
aatgtagaattcgattataatattgtaggagcagaattctacaggaagaatataaaagat
aatttacaggaaaaacccagagctgatacgatgattctgggaactgactactgccagttg
ggaggaggcagaggaggtagatttaaacctccaaaactggaagagctttatgaaaagctg
tatggaaataaatttgatgaagcacacaacgcagcagccgacgtaaatgctacagctcag
gttttctttgagatgatgagaatcggagtggttcctgctgaggttttgaaaatatcagaa
gatcaattaaattatttcaaaagtctttatcctgatccgatcaagccttttggcattatc
atccgaagacaggttgcagatttccataataaaaagaaacagcaggactttggaagtatt
gatgagattgatctaggtaaatatttcaactttgacaatcatagtgttttttctacatta
acagctactaccagtattaacgacctgataaaaaaagcttctgaagaaaacttccctgct
gtcgggatggtggatcttggaaatatgatgggagcttttaagtttgtttctgcagtagag
ggagctaatggggatcgtgcaaaaaaatataaagaatatttagctaaaaaacaggaagca
gaagaaaacggaacggattttaatgaagaagagccggtttcggaatcattgattcctgtg
gtaggttgtgaattttatatttcggatcgttatgagcaaaagcagtttaccaaagatgat
ccggataggagaacacaagtggtacttttggcaaaagattttaatggatataaaaatttg
gccaagctttcaagtattggtttcttaaaaggattttatttcggggttccgagggtaagt
cgagaattaatcgctcaatataaagaaggcgtcattgcattgacttcagggattcatggt
gatattcctgatgcgatcttaaatacaggggagcaaaaaggtgaggagcttttcaaatgg
tggaaagatacttttgaagatgatttttatgtacagcttcaaaaccataagctgcctgaa
gaagagcatttaaatgaagttttattgtatctggcagataaatacaatgttaaaatatta
gcgcaaaacgaaactttttataccaataaagatgattccaatattcaggatattgtaagc
tgtatcaaagatggtgaaaagctttcaacacctgttggtaaagggtttggtaaaaggagg
gggcttgcaacaggagaatactacatcaaaaattcagacgagataaaagaggcttttctt
gcttatccggatgcttttgaagcgtatgaagaattctttgcaaaatttaagccttatact
ctaaaaagagatgttctccttccgaagtttgatattccggaagaatttattcacgccgaa
gatgaggtagacggcggaaaaagaggagaaatggcttatcttacccatttgacctatgaa
ggagccagaagacgatatggggagaatggtattactgctgatatcaaagaacgtcttgat
tttgagttggaagtaattgccaataccggttatccggggtacttccttattgtacaggac
ttctgtaatgaagcccgtaatatgggagtttgggtaggtccgggaaggggatctgctgca
ggttcggcagtagcttattgtatcggaattaccaatgtagaccctattaagtatgatctc
ctttttgagagattcctgaatccggaaagggtgtccatgcccgatattgatattgacttt
gatgatgaaggaagagacagggtaatcaaatgggttattgaaaaatatggacaaagtcag
gtggcacagattattacgtattcggttcttggtgggaaatctgccattaaagacgccgga
agggtattggatgtaccaattcctgataccaataacattgctaaacttattccctccact
ccgggaatgaatattgcgaaagctttagcgaaatatgataaattgaaaccggaagagcaa
atgctcgttgatgagatgagatatgttcttgatagtcctgatgatgcccgtcatggagtg
cttgcgagtgcgaagaaaatggaaggatgtatcaggaataccgggattcacgcctgtggt
gtaattattacgccggaagatgtaagtaatcttgttccggtgacgattgcggcaaaggat
gccgatattttagtgtctcagtttgataactcggtagcggaaagtgcaggtcttctgaag
atggacttcctgggtctgagaaccttaacgattattaaagatgctttaaaattggtgaaa
gcaagatatggagtagatattgatccggatttgattccattggatgatactaaaacatat
caattatttaaagaaggaagaacggttgggattttccaatatgaaagtcccgggatgcaa
aaatacatgagggagcttaaaccaactgtttttgccgaccttattgccatgaatgccttg
tatcgtccgggtccgattaaatacattccgaactttattaacagaaagcatggaattgaa
gaaattgtttacgatttaccggaaactgaagaataccttaaagaaacctatggtattaca
gtatatcaggagcaggtaatgcttttatctcaaaagttagccaactttacaaaaggtgag
gccgataccttgagaaaagcaatgggtaaaaaacagattgacgttcttaataaaatgtat
cctaaatttattgaaggaggacgaaaaaacaatctgaatgaagagcgattggaaaaaatc
tggaacgactggaaagcctttgcagaatatgccttcaataaatcccactcaacatgttat
gcttttattgcttatcaaacagcttttttgaaagccaattatcctgcagaatacatggcg
agtgtaatgagtaataatatcaacaatacagactctattaccatgttcatggaagattgt
aagagtatgggagttgatgttttgggacctgatgtgaatgaatctcaatataaattctcg
gtaaacgaaaaagggcagattcgatttggtttgggagctattaaaggaatcggagaggga
ccgagcgaagctattacaagagaaagggaaaacggacgattcaaaaatatttatgatttc
tttgagaggattttaccttctcaaatgaataaaagagttgcggaaagtttggtgctggca
ggtgcttttgacgaattggatgccttccatagaggtcagtattttgacattgatatggcc
gggagaacgaatctggagagattgattcgttatgggcagagcttccaggaaagtaaaaat
gaaatggaacattcattatttgcagatttcgctgaagaagttcagattgaacaacctaaa
ttggctccttgtccggaatggcccaatatgcataagcttaataaagaaaaagaaatcatt
ggtttctatctttctgctcacccgctggatgagtttaaatatcaatttcagtttatgcag
ggacagctttccaaaaaagcggttcttgaaaaagatattgaagagaaaacggatgaaacg
cctgttctggaacaggatgcacaggatgaatctgtagatcttactgaaattgtatccgat
gagatgtctatcggggatgaagaagttgtagaagaggttactaagaaagctgagccgaaa
ggaaatttcttatttttaaatcttgatgaagtggatgcatataaggagcaggctttcgct
aataaacaggaggaattatttgaagagaaaaagaaagactggaaaacgcttcagaaagaa
agagaaaatggtggcggaggaaaagaatatactgttgcaggtttgattacggaatataga
gttcaggatggttttagaagtggtgaaaaagtagcttttgtaactctggaagattattca
ggttcttattctttcaggttgggagatagagattatatgaggttgaaagaaaagcttgaa
gtccagagatttgttatttttaaaataaaatttgctcaggtaaaagatggaagagttttc
gtgaatgtgaatgatgtaattgaacttcaggaagcatttgaaagatttgccaaaagtatt
tcattggtgatggatgtgatggatgtgagacctgaagatctggattttttcagaacagtt
ttggagagaaataagggaaatcagaaattaaaattctttatcaaaaatattgatgatgat
tctcatattgaagttcaatcgatgaaacactctgtggatttgaacggagatttgattaaa
gaaattcaactattgaataagtatgagttttatctgaactaa
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