Chryseobacterium sp. PMSZPI: ACL0VS_16540
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Entry
ACL0VS_16540 CDS
T11402
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
chrr Chryseobacterium sp. PMSZPI
Brite
KEGG Orthology (KO) [BR:
chrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrr03032
]
ACL0VS_16540 (gyrB)
03400 DNA repair and recombination proteins [BR:
chrr03400
]
ACL0VS_16540 (gyrB)
Enzymes [BR:
chrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACL0VS_16540 (gyrB)
DNA replication proteins [BR:
chrr03032
]
Prokaryotic type
DNA Topoisomerases
ACL0VS_16540 (gyrB)
DNA repair and recombination proteins [BR:
chrr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACL0VS_16540 (gyrB)
BRITE hierarchy
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Gene cluster
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Other DBs
NCBI-ProteinID:
XNN37519
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Position
3833310..3835244
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AA seq
644 aa
AA seq
DB search
MSQKQYTASSIQALEGMEHVRMRPSMYIGDVGTRGLHHLVYEVVDNSIDEALAGYCDTIF
VAIKEGNGVEVSDNGRGIPVDFHEKEQKSALEVVMTKIGAGGKFDKDSYKVSGGLHGVGV
SCVNALSNEMITTVYRDGNIYQQVYSKGKAQTGVEEIGHSEKRGTKQFFQPDDTIFTELV
YNYDTLASRLRELSYLNKGITITLTDEREKLEDGSFRTEVFHSEGGLKEFVAYIDGNRES
IMEHVIFMEGERDDIPVEVAMRYNTSFNENLHSYVNNINTHEGGTHLAGFRRALTRTLKK
YADDLGIPQKEKVEITGDDFREGLTAVVSVKVMEPQFEGQTKTKLGNSEVSGAVDKIVGE
MLTNFLEENPTEAKQIVQKVVLAAKARQAAKKAREMVQRKSPMGGSGLPGKLSDCSSKDP
AESEIFLVEGDSAGGTAKQGRDRHFQAILPLRGKILNVEKSMLHKVYDNEEIRNIYTALG
VSVGTEEDSKALNMAKLRYHKIVIMTDADIDGSHISTLILTFFFRYMKELIENGYIYIAQ
PPLYLLKRGNKKVYAYNEKEREEFTLEMSPDGKGVEVQRYKGLGEMNPEQLWETTLNPEH
RILKQVTIDNAVEADSVFSMLMGDEVPPRREFIEKNAKYAKIDA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaaacaatatacagctagtagtattcaggcattggaaggaatggagcacgta
cgtatgcgtccttcaatgtacattggtgatgtagggacaagaggtctccatcatttggtt
tatgaagtagtagataactctattgacgaagcgttggcaggatactgcgacacgatcttt
gttgccattaaagaaggaaacggagttgaagtaagcgataatggtaggggtattccggta
gatttccacgaaaaagaacaaaaatctgctcttgaagttgtaatgacaaaaatcggagcc
ggaggtaagtttgataaggattcttacaaggtttccggaggtcttcacggagtaggggta
tcgtgtgtaaatgcactttccaacgaaatgatcaccaccgtttatagagatggtaatatc
tatcagcaagtgtactctaaagggaaggcgcaaaccggagtggaagaaatcgggcacagt
gaaaaaagaggaaccaagcagtttttccagccggatgatactattttcactgaactagtg
tataactatgacacgttggcaagccgtttaagagaactttcttaccttaataaaggaatt
accattactcttaccgatgaaagagaaaaattggaggacggttctttcagaacagaagtt
tttcattctgaaggaggtttaaaagaatttgttgcctatattgacgggaaccgtgaatct
atcatggaacacgtaatctttatggaaggtgaaagagatgatattcctgttgaagtagca
atgcgttacaatacttctttcaacgagaatcttcactcttatgtaaacaacattaatact
catgaaggagggactcacttagcaggtttcagacgtgctttgacaagaactcttaagaaa
tatgctgatgatttagggattccacagaaagaaaaagtagaaattacaggggatgacttc
cgtgagggattaacagctgtagtttctgtaaaagtaatggagcctcaatttgaaggacag
acgaaaacaaaattagggaactctgaagtttccggagctgtagataaaattgtaggggaa
atgctgactaacttccttgaagaaaatcctactgaagcaaaacagatcgttcagaaagta
gttttggcggctaaagcaagacaggctgctaaaaaagcccgtgaaatggttcagagaaaa
tctccgatgggaggttcaggacttccgggaaaactatctgactgttcatccaaagatccg
gcagaatctgaaatcttccttgtggagggagattccgcaggtggaacagcaaaacaagga
cgtgacagacacttccaggctattcttcctttaagaggtaaaatcttgaacgtagagaag
tctatgcttcacaaggtatatgataacgaagaaattagaaatatttatactgctcttgga
gtttctgtaggaactgaagaggatagtaaggcattgaatatggctaagctaagatatcat
aaaatcgtgatcatgaccgatgccgatatcgatgggtctcacatttctactttaattctt
acgttcttcttcagatatatgaaggaacttattgaaaacggatatatctatatcgctcaa
ccacctttatatttattgaaaagaggtaataaaaaagtgtacgcttataacgagaaagag
cgtgaagagtttaccttagaaatgtctccggacggaaaaggagtagaggtacaacgttac
aaaggtcttggagagatgaacccagagcaactttgggaaacgactcttaatcctgagcac
agaatcttaaagcaggtaacgattgataatgcagttgaggctgacagtgttttctcaatg
ttgatgggggatgaagttccgccaagaagagaatttattgagaagaatgcaaaatatgcg
aaaattgatgcataa
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