Chryseobacterium sp. PMSZPI: ACL0VS_17405
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Entry
ACL0VS_17405 CDS
T11402
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
chrr Chryseobacterium sp. PMSZPI
Pathway
chrr03030
DNA replication
chrr03430
Mismatch repair
chrr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACL0VS_17405 (holA)
03430 Mismatch repair
ACL0VS_17405 (holA)
03440 Homologous recombination
ACL0VS_17405 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrr03032
]
ACL0VS_17405 (holA)
03400 DNA repair and recombination proteins [BR:
chrr03400
]
ACL0VS_17405 (holA)
Enzymes [BR:
chrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACL0VS_17405 (holA)
DNA replication proteins [BR:
chrr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACL0VS_17405 (holA)
DNA repair and recombination proteins [BR:
chrr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACL0VS_17405 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_delta2
DUF3201
Calici_coat
Motif
Other DBs
NCBI-ProteinID:
XNN37686
LinkDB
All DBs
Position
4041156..4042193
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLILKNIKNKEVLPIYFFHGEEAYFIDVAVKALEHNFLEEDEKAFNQTVTYGKDTS
YQEVLSLARQFPMMGDKQVIIVKEAQDLKFNEEENRILEAYVENPVPSTVLVFAHKHKKL
DSRKKAAKALDKANTLFLSESVKESNLPKWISDECVKLNIKTAPNISHLLAEYLGNDLSR
IANELNKLKIILKEDEVLDGTIIENHIGISKEYNIFELQKALGTKNANAAFKIAHFMGKN
PKNNPFVMMLASLYSYFSNVIIYQTMAGQSPQTIASQMGVNPYFIKDYAESARLYPLKHA
TRVISILREFDMKGKGLGAVNMGEAELIKELVYKIINVDKIKMKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaaatattaaaaataaagaagttttacctatttat
tttttccacggagaagaagcctactttattgatgtcgccgtaaaagcccttgagcacaac
tttctggaagaagatgaaaaagctttcaaccagactgttacttatgggaaagatacctct
tatcaggaagttctttctttggcaagacagtttccgatgatgggagataaacaagttatt
attgttaaagaagcacaggatttaaaattcaatgaagaagaaaaccgaattttggaagct
tatgtagaaaaccctgtaccttctacggtgttggtttttgctcataaacataagaagctg
gacagtagaaagaaagcagctaaagctttagataaagccaatacgcttttccttagtgag
tcggtaaaagaaagtaatcttcccaaatggatttccgacgaatgtgtaaagcttaacata
aaaaccgcacccaatatatcccatcttctggccgaataccttggaaatgatctttcaaga
attgccaacgaactgaataagttgaaaattatccttaaagaagatgaggtgctggacgga
accattattgaaaaccatatcggaatcagtaaggagtataatatttttgaacttcagaaa
gctttgggaaccaaaaatgccaatgcagcttttaaaattgcccattttatgggtaaaaat
ccaaaaaataatccttttgtgatgatgttggccagtctttacagctatttttccaatgtc
attatctatcaaacaatggccggtcagtctccacagactattgcttcacaaatgggagta
aatccgtattttattaaagattatgcagaaagtgcacggttataccccttaaaacatgcg
acgagagtcatttctattttaagagagttcgatatgaaagggaaaggactgggcgcggta
aatatgggcgaagcggagttaattaaggagttggtatataagattatcaatgttgataag
attaaaatgaaggtttag
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