Chryseobacterium sp. 3008163: EAG08_05130
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Entry
EAG08_05130 CDS
T05679
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrs
Chryseobacterium sp. 3008163
Brite
KEGG Orthology (KO) [BR:
chrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrs03032
]
EAG08_05130
03400 DNA repair and recombination proteins [BR:
chrs03400
]
EAG08_05130
Enzymes [BR:
chrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EAG08_05130
DNA replication proteins [BR:
chrs03032
]
Prokaryotic type
DNA Topoisomerases
EAG08_05130
DNA repair and recombination proteins [BR:
chrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAG08_05130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AYM99804
UniProt:
A0A3G2G515
LinkDB
All DBs
Position
1146911..1148014
Genome browser
AA seq
367 aa
AA seq
DB search
MNQSDQEIISHLKPSKIVKIMKDPVASAKAVNLIYTSDAETAGIIRRKRGKKYLYFKDGE
KIKDKEEIKRINGLVIPPAWENVWICAIDNGHLQATGLDARKRKQYRYHSLWSALRNHTK
FYRMLQFGYALPEIRLQLEKDLALRNFEKRKILALIVSLMQRTNIRIGNSIYEKLYGSFG
LTTLKGKHVKVEGQKINFAFKGKKGVMHDVNLKSKRLAKLITKCKEIPGKELFQYYDSEG
NRHHIDSGMVNDYIKELSGEDFTAKDFRTWSGTVNALIAFKEIGYAENNTQYKKKVKAAL
DIVAEHLGNTSTVCRKYYVHPLVINLYENNSIKKYLDALEVIEENDGKAGLTHEEKLVLK
ILENEKM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatcagaccaagagattatttctcacctgaagccgtcaaagattgttaaaatt
atgaaggatccggtagcttctgcaaaggcagtgaatcttatttacacttccgatgcagaa
acagccggtatcatccgcagaaaaagaggtaagaaatatctttatttcaaagacggcgag
aaaattaaagacaaagaagagatcaagcgtatcaatggcttggtcattcctccagcatgg
gaaaatgtctggatttgcgccatcgataatggccatcttcaggcaactggtctggacgca
agaaaaagaaaacaatatagatatcattcgctttggagtgcattgcgaaaccatactaaa
ttctacagaatgcttcagtttggctatgccttacctgaaatccgtctgcagttagaaaaa
gatttagccttaagaaatttcgaaaaaagaaaaatccttgcattaattgtaagcttaatg
cagcgcacgaacattagaattgggaatagcatttacgaaaaactttacggttcttttggc
ttgacaactttgaaaggaaaacacgtaaaagtggaaggacagaaaatcaattttgccttc
aagggaaaaaaaggagtaatgcatgatgtcaatctgaaaagtaaaagactcgcaaaacta
attacgaaatgcaaagaaattccgggaaaagaactctttcaatattacgacagcgaagga
aaccgccatcacatcgattccggaatggtgaatgattatattaaagaattaagtggagaa
gatttcacagcaaaagacttcagaacctggtcaggaacagtcaatgctttaattgcattc
aaagaaatcggatatgccgaaaacaatactcaatacaaaaagaaagttaaagctgcatta
gatattgtcgctgaacatctcggaaatacaagcaccgtttgcagaaagtattacgttcat
cctttagtcatcaatctttacgaaaacaattctatcaaaaagtacctagatgctctagaa
gtcattgaagaaaacgacggaaaagcaggattaacccatgaggaaaaattagttttaaaa
attttggaaaacgaaaaaatgtag
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