Chryseobacterium sp. 3008163: EAG08_13140
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Entry
EAG08_13140 CDS
T05679
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrs
Chryseobacterium sp. 3008163
Brite
KEGG Orthology (KO) [BR:
chrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrs03032
]
EAG08_13140 (topA)
03400 DNA repair and recombination proteins [BR:
chrs03400
]
EAG08_13140 (topA)
Enzymes [BR:
chrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EAG08_13140 (topA)
DNA replication proteins [BR:
chrs03032
]
Prokaryotic type
DNA Topoisomerases
EAG08_13140 (topA)
DNA repair and recombination proteins [BR:
chrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAG08_13140 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AYN01131
UniProt:
A0A3G2GAT9
LinkDB
All DBs
Position
2849274..2851844
Genome browser
AA seq
856 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLATFSPDYEVSADKK
KLVTELKSAVKKAEMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IENPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLVVEREKE
IRQFTPKASFKLDGVFLNKAEQEIAAKLKKDFDKEEDAEKFLELARTTEFKVLNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGFITYMRTDSVNLSQEAIEGAK
NQITSEYGAEYSAPRKYTTKSASAQEAHEAIRPTDFSVKSIGDVQLSKLYQLIYRRTLAS
QMANAKIEKTVIEIGNAKLSQHFEAQGEVIIFDGFLKAYGIVKTEDEDEESNEKLLPKVT
VGEVLDYKKITATEKFTRPAARFTEAMLVKKLEELGIGRPSTYAPTIQTIQNREYVDKRE
LEPQTREVVKISLAKDKIKKEVLEDKFGGDKNKFIPTDIGEVVNDFLTNNFAEILDYGFT
ARVEESFDEIANGAQKWKEMMTDFYSKFHPRIEDVEENADRANGERLLGVDPKSGKNIYA
RIGRFGPMIQIGEQDDEEKPIFASLMAGQNIATIALEDALELFKLPFELNNFEDQSVTIG
VGRFGPYVKWGETYISIPKGEDPLSVDQKRAEEIIAEKKLADAPIANFKGEPITKGTGRF
GPFIKYQSIFINVPKRYDFDNLSQSDINELVEAKLEKEANRYIQQWEKEKISLENGRWGP
FIKFGKAMFKIPKKKDDTKYESDELKEVSLDEVKKWITAQDPKAFAEKKKPAAKKPAAKK
ATTAKKAPAKKPAAKK
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtcgagtctccggcaaaagcaaaaactattcagaaatat
ttagggaaggatttcgaggtcaaatcgagcttcgggcacatccgtgaccttccaaaaaaa
ggaatgggaattgaccttgccaccttcagtccggattacgaagtttccgccgataaaaag
aaactggtaacagaattaaagtctgccgtaaagaaagccgaaatggtttggctcgcttcc
gatgaggaccgcgagggtgaagcaatcgcctggcatttggcagatgaattaaaactgaaa
cctgaaaacagaaaaagaatcgtctttcacgagatcaccaaaaatgctattcttaaagca
atagaaaatccgagagatattgatcagaacctagtaaatgctcaacaggcaagaagagtt
ttagacagaattgtaggtttcgaaatgtctcctgtactttggaaaaaagtaaaaccggga
ttgtctgcaggaagagtgcagtcggtagccgtaagattggtggttgaaagagaaaaagaa
attcgtcagtttactcctaaggcaagtttcaagcttgacggagttttcttaaataaagca
gagcaggaaatcgctgcaaagcttaaaaaagatttcgataaagaagaagacgcagagaaa
ttcttagaattagcaagaaccacagaattcaaagttctgaatgtggaaaccaaaccggga
acacgttctgcttctgcaccgtttacaacgtctacgcttcagcaggaagcttcgtcaaga
ttaggttataatgtaaccaacacgatgcgtttggctcagagattatacgaagaaggtttc
attacttatatgagaactgactctgtaaatctttctcaggaagctattgaaggtgctaaa
aatcaaattacttcagaatatggggcagaatattctgcacctagaaaatataccaccaaa
tctgcttcagcgcaggaagctcacgaggcaatccgtccgacagatttttctgtgaaatcg
attggtgatgttcagttgagtaaattatatcagttaatttacagaagaacgttagcttct
caaatggcaaatgctaaaattgagaaaaccgtcatcgaaataggaaatgcaaaactttca
caacattttgaagcgcagggtgaagtcattatattcgacggtttcctaaaagcttacgga
atcgtaaaaactgaagacgaagacgaagaaagcaacgaaaaattattgccgaaagttaca
gtaggtgaagttttagactataaaaaaatcactgctacagaaaaatttacaagacctgct
gcaagatttaccgaagccatgttggttaaaaagctggaagaattgggaattggccgtccg
tcaacgtacgctccaaccattcagacgattcagaatcgtgaatatgtagacaaaagagag
cttgaaccgcaaactcgtgaagtggtgaaaatctctttagctaaagataaaatcaaaaaa
gaagttcttgaagataaattcgggggcgataaaaataaatttattcctaccgatattggt
gaagtggtgaatgatttcttaaccaacaatttcgctgaaatccttgattacggttttaca
gcaagagtggaagaaagctttgacgaaattgccaacggagcgcagaaatggaaagaaatg
atgaccgatttctactcaaaattccatccgagaattgaagatgtagaagaaaatgcagac
cgtgccaatggagaacgtcttttaggagttgatccaaaatcagggaagaatatctatgca
aggatcggaaggttcgggccgatgattcagattggtgaacaggacgatgaagaaaagcca
attttcgcatcattaatggccggacaaaatattgcaaccatcgctttagaggatgcttta
gaattgtttaaattaccttttgaactcaataatttcgaagaccaatcagtgacaatcggt
gttggaagattcgggccttatgtgaaatggggcgaaacgtacattagcatcccgaaaggt
gaagatccactttctgtagatcaaaagcgtgcagaggaaattattgccgagaagaaatta
gctgacgcaccgatcgccaacttcaaaggtgaaccaattactaaaggaacgggtagattc
ggacctttcattaaatatcagagcatctttatcaacgttcctaaaagatatgattttgat
aatctttctcaaagcgacatcaacgaattggtggaagctaaacttgagaaagaagccaac
agatacatccagcagtgggaaaaagagaaaatttctcttgaaaacggaagatggggacca
ttcatcaaatttggaaaagcaatgttcaaaattccaaagaaaaaagatgataccaagtat
gaatctgacgagttgaaagaagtttctcttgatgaggttaaaaaatggattaccgcacag
gatcctaaagcttttgccgagaaaaagaaacctgcagctaaaaagccagctgctaaaaaa
gcgactacagcgaagaaagctcctgctaagaagccagccgctaagaaataa
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