Chryseobacterium sp. 3008163: EAG08_15900
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Entry
EAG08_15900 CDS
T05679
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chrs
Chryseobacterium sp. 3008163
Pathway
chrs03420
Nucleotide excision repair
chrs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EAG08_15900
03430 Mismatch repair
EAG08_15900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrs03400
]
EAG08_15900
Enzymes [BR:
chrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAG08_15900
DNA repair and recombination proteins [BR:
chrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAG08_15900
MMR (mismatch excision repair)
Other MMR factors
EAG08_15900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AYN01584
LinkDB
All DBs
Position
3423988..3426318
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AA seq
776 aa
AA seq
DB search
MDYLKGLNESQYEAVTTLQGPLMVLAGAGSGKTRVLTMRIAHLITNGVDPFNILALTFTN
KAAKEMKERIAKVVGQSNARSLWMGTFHSVFARILRSEAHYLGYPSNFTIYDQQDALNVI
RKVLKDMNIDADLYKPKKVQSRISNYKNNLITVKAYYNNPELMEADEKANMKFIGKIYEK
YVEACYKNGSMDFDDLLLKTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAVTVSLEQNYRSTQNIVNAANAV
IAKNLQQFKKNVFSENEEGEKIKVYRSLSDADEANFVAGNIWELSNREQKKFSDFAILYR
TNSQTRAFEDSLRRKNIPYKVYGGLSFYQRKEVKDLIGYLRLLVNENDSEALMRIINYPT
RGIGETTQNKLIVFADSQNLPVSKVLDNLGIYAPQLKFNNGVLTKLSDFWSMIKAFQVLL
KTETAYSVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQQQIEDGDPS
LPNFLENIALSADTQRKDDNEDMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSATRE
DLEEERRLFYVALTRAEKQAFFSYAVSRFQWGKITDAEPSRFLSEVDEEYIEFLNPAIEK
RFINNAGITSNIFDEHPSEMRSFKKVEKKTISKSENDKPIAEPRKLKPVATAKIINPSGA
SSQDIEVGDKVRHDRFGIGEVKFLDGTDPQNIKAKVVFLHEGEKNLILKYAKLTKI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggattatctgaaaggactcaacgaatcacaatatgaagccgttaccactttacaagga
cctctgatggtgcttgcaggtgctggttccggaaaaacgcgtgtattgacaatgcgtatt
gctcatttgattaccaatggtgtagatcctttcaatattctggcattgacctttaccaat
aaggcggcaaaagaaatgaaagaacgtattgcaaaagtggtgggacaaagcaatgcgaga
agtctttggatgggaacttttcactcggtttttgcaagaattctgagaagtgaagcgcat
tatttgggttatccttcgaactttacaatttacgatcaacaagatgctttgaacgtcatc
agaaaagtattgaaagacatgaatattgatgccgatctatacaagcctaaaaaagttcag
tccaggatttcaaattataaaaataacctgattactgtaaaagcatattacaacaatcca
gaattaatggaagctgacgaaaaagccaacatgaaattcattggaaagatttatgagaaa
tatgtagaagcttgttataaaaacggttcaatggattttgatgatttattgttgaaaacc
aatgagcttttaacaagatttccggaagttttagcaaaatatcaggacagattcagatat
attttggtcgatgagtaccaagatacgaatcactctcaatatttgattgtgaaagcttta
gcctcaaaatttgaaaatatttgtgtggtgggagacgatgcacagtcgatttactctttc
cgaggtgcgaatatttacaatattttaaactttaaaaaagattatccggacgcagtaacg
gtttcgttggagcaaaattaccgttcgacacaaaatattgtaaatgctgcgaatgcagtg
attgctaaaaacttgcaacagtttaagaaaaatgttttcagtgaaaatgaagaaggtgaa
aaaatcaaggtgtaccgttcgctttctgatgctgatgaagccaatttcgtagctggaaat
atttgggaactgagtaacagagaacagaaaaaattcagtgattttgcgattttataccgt
accaactctcagacaagagcttttgaagactctttgagaagaaaaaatattccttataaa
gtgtatggaggtttgtctttctaccaaaggaaagaggtaaaagatttgatcggttatcta
cgtcttttggtgaatgaaaatgattctgaagccttaatgagaatcatcaattatccaaca
agaggaattggtgagactactcagaataaattaattgtttttgcagattcgcaaaatcta
ccggtgtctaaagttttagataatctcggaatatatgcaccacaattaaaatttaataat
ggagttttaactaagctgagtgatttttggtcgatgatcaaagcatttcaggttttgctt
aaaactgagacggcatacagcgttgcaatggaagtggctaagcgaagcggtttgattaaa
tttttaaaggatgatcagactcccgaaggaatttcccgtgtagaaaacgtgcaggaatta
atgaactcgatgcagggttttatcgaagaacagcaacaaatagaagatggagatccgagt
ttgccgaatttccttgaaaatattgcactttctgccgatactcaaaggaaagatgataat
gaagacatggtttctctgatgaccattcacctttcaaaaggtctggaatttccagttgtt
catttggttggattagaggaaaatctgttcccaagttttatgagttcggcaacccgcgaa
gatttagaagaagaaagacgtttgttctatgttgcgttgacaagagctgaaaaacaggca
tttttctcgtatgcagtttctcgttttcaatgggggaaaattaccgatgccgaaccttca
aggtttttgagtgaagtggatgaagagtacattgaatttttaaatccggcgatcgaaaag
agatttataaacaatgcagggattacgtccaatatttttgatgaacatccttcagaaatg
agaagctttaaaaaagtagaaaagaagaccatctctaaaagcgaaaatgataaacctatt
gctgaaccaagaaaactaaaacctgtagccacagcaaaaatcattaatccaagcggtgct
tcttcgcaggatattgaggttggtgacaaagtgagacatgaccgcttcggaattggtgaa
gtgaaattcttggatggaactgatccgcagaatatcaaagcaaaagtggttttcttacac
gaaggtgagaagaacttgattttgaaatatgctaagctgacaaagatataa
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