KEGG   Chryseobacterium sp. 3008163: EAG08_16835
Entry
EAG08_16835       CDS       T05679                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
chrs  Chryseobacterium sp. 3008163
Pathway
chrs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chrs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EAG08_16835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chrs03019]
    EAG08_16835
Enzymes [BR:chrs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EAG08_16835
Messenger RNA biogenesis [BR:chrs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EAG08_16835
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 P-loop_SecA AAA_22 ERCC3_RAD25_C Cas3-like_C_2 Helicase_C_2 HEM4 UvrD-helicase PhoH Flavi_DEAD
Other DBs
NCBI-ProteinID: AYN01744
UniProt: A0A3G2GB00
LinkDB
Position
complement(3616160..3617428)
AA seq 422 aa
MLFTDLNIIKPILDALQKQGYEKPTPIQEQAIPSILEHRDVLGTAQTGTGKTAAFAIPIL
QNLTERKVPKNNHIKALILTPTRELAIQIEESFDAYGKNLPLRKLVVFGGVKQGSQETAL
RRGVDILVATPGRLLDFIAQGIISLKNLEIFVLDEADRMLDMGFVHDVKRIIKLLPQKRQ
TLFFSATMPTEIQKLADSILNTPIKVSVTPISSTAETIKQAVYFVDKDNKLELLTHILQN
DISGAVLVFSRTKHGADKIARRLQSANISAEAIHGNKSQNARQNALSNFKGGRTRVLVAT
DIAARGIDIDELKYVVNYELSDVAETYVHRIGRTGRAGSEGSSISFVDGLDLLNLKDTEK
LIGMKIPVEKNHPFHTDNLVVEKRDSNNKPFTPRPRPAGGGQQQKSDHSKKPKNKSNFSR
KK
NT seq 1269 nt   +upstreamnt  +downstreamnt
ttgttatttacagacttaaacattatcaagcccatcttagatgcgcttcaaaagcaaggt
tatgaaaaacctacccctattcaggaacaagcaattccttcaattttagaacacagagat
gtactgggaactgcacagacaggaaccggaaaaacagcagcatttgctatccccatctta
caaaaccttaccgaaagaaaagttcctaagaataatcatataaaagcattaattcttact
ccaacgagagaattagcgatacagatcgaagaaagcttcgatgcatacggaaaaaattta
ccgcttagaaaattagtggttttcggcggtgtaaagcaaggaagccaggaaacagctttg
agaagaggtgttgacattttggtggcaactcctggaagactattagattttatcgctcag
ggaattatcagtttaaaaaatcttgaaatctttgtactagatgaagccgacagaatgttg
gatatggggtttgtacacgatgtaaaaagaatcattaaacttttacctcaaaaaagacaa
acgcttttcttctcggcaacaatgcctacagaaattcagaaattggcagattctattttg
aatactccgattaaagtttcagtaactccaatttcttcgactgcggaaacaatcaaacaa
gcggtttattttgttgataaagacaataaactagaattgttgacgcacattttgcagaat
gacatttctggtgcagtattagttttctcgagaacaaaacacggtgcagataagattgca
agaagattgcagtctgcaaacatctccgcagaagcgatccacgggaataaatctcaaaat
gcaagacagaatgctttaagtaattttaaaggaggaagaacacgtgttttggtagcaaca
gatatcgccgcaagaggaattgatattgacgaactgaaatatgttgtaaactacgaactt
tcagacgttgcagaaacttacgttcacagaattggtagaacgggtcgtgcaggttcagaa
gggtcttcaatctcattcgtagatggtttagatttattaaacctaaaggatacagaaaaa
ttgattggaatgaaaattccggttgaaaaaaatcatcctttccacacggataatctggtg
gttgaaaaaagagattcaaacaataaaccttttacaccaagaccaagacctgcaggtggt
ggtcagcaacaaaaatcggatcacagtaagaagccaaaaaacaagagtaatttttctaga
aagaaataa

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