Chryseobacterium sp. 3008163: EAG08_17710
Help
Entry
EAG08_17710 CDS
T05679
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chrs
Chryseobacterium sp. 3008163
Pathway
chrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAG08_17710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrs03019
]
EAG08_17710
03016 Transfer RNA biogenesis [BR:
chrs03016
]
EAG08_17710
Enzymes [BR:
chrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EAG08_17710
Messenger RNA biogenesis [BR:
chrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EAG08_17710
Transfer RNA biogenesis [BR:
chrs03016
]
Prokaryotic type
tRNA degradation factors
EAG08_17710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
PCB_OB
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AYN01884
LinkDB
All DBs
Position
3800046..3802253
Genome browser
AA seq
735 aa
AA seq
DB search
MSIPQAITETIILADGREITIETGKLAKQADGSVVVKIGGTMLLATVVASKEAKDGVDFL
PLTVDYREKFYAGGKIPGNFFRREARPSDQEILTMRLVDRVLRPLFPEDFHAEVQVMISL
ISYDGQSIPDDLAGLAASAAIAITDIPFNGPMSEVRVVRIDGKLAVNPNYEDLKLADLDI
MVGATKDSIVMVEGEMKEISEAEMLEAIQFAHVEIKKQVEAQERLAEKVGKSLPKREYSH
ENHDEAIREKVWKETYDKVYEVAKIPSGKEERGEKFKAVLAEFLSQYVEHAEELERVTPF
AKVYFHDVEKEAMRQMILNDKIRLDGRDPQTIRPIWSEIDYLPGAHGSAIFTRGETQSLT
AVTLGSVKDANMVDSVMVNYDERFFLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALA
NMIPEENPYTIRIVSDILESNGSSSMATVCAGTLALMDAGVQIKKPVSGIAMGLVTDVKS
GKFTVLSDILGDEDHLGDMDFKVTGTADGITACQMDIKIQGLSMDIMEKALLQARDGRLH
ILDKLNETISAPREDVKPHAPKMVMLEISKDFIGAVIGPGGKIIQQMQKDTDTVIAIEEV
GEIGRIEISGVSREKINEAIARINEITFVPTVGEVYQGKVVKVMDFGAFVAIAKGTEGLL
HISEIEWARLDKVPYKEGDEVEVKFMGYDDRKKMKLSRKVLLPRPERPAQKPRNEGNVNP
EGKDQPGEHKPLNEA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagtatacctcaagcaattacagagacgatcattcttgcagacggcagagagatcaca
attgaaacaggaaaattagcaaaacaggctgatggttctgtagtcgtaaaaatcggcgga
acaatgcttttagcaactgttgtagccagcaaagaagcaaaagatggtgtagatttctta
ccattgacagtagattacagagaaaaattctatgcaggtggaaaaattcctggaaacttt
tttagaagagaagctagaccttcagatcaggaaatcctgacaatgcgtttggtagacagg
gttctaagaccattattccctgaagatttccatgcggaagttcaggtgatgatttcattg
atttcttatgacggacagtcaattcctgacgatttagcaggtcttgcagcttcggcagcg
attgcaattactgatattcctttcaacggaccaatgtctgaagtaagagtagtaagaatt
gacgggaaattagcggtaaaccctaattatgaagatcttaaattggctgaccttgacatc
atggtgggtgcaactaaagattctatcgtaatggtggaaggtgagatgaaagaaatttct
gaggcagaaatgcttgaagcaattcaattcgctcatgttgaaatcaaaaaacaagttgaa
gctcaggaaagattagctgaaaaagtaggcaaatctttaccaaaaagagaatatagccac
gaaaatcacgacgaagcaattcgtgagaaagtgtggaaagaaacatacgataaagtatac
gaagtagcaaaaattccttcaggaaaagaagagaggggtgagaaatttaaagctgtattg
gctgaatttttatctcaatatgtagaacatgctgaagagttagaaagagtaactcctttc
gcaaaagtatatttccatgacgtggaaaaagaagcgatgcgtcagatgattttaaatgat
aaaatccgtcttgatggtcgtgatcctcaaacgattcgcccgatctggagcgaaatcgat
tatttacctggagctcacggttctgcaatcttcacaagaggtgaaactcaatctttaact
gctgtaactttaggttcagtaaaagatgcgaacatggtagacagcgtaatggtaaactat
gacgaaagattcttcttacattataacttcccgccgttctcaacaggtgaagctcgtcct
ttgagaggaacttcaagaagagaagtaggtcacggaaacttagctcaaagagctttggcg
aatatgatcccggaagaaaatccttataccatccgtatcgtttctgatattttagaatca
aacggttcatcttctatggcgactgtttgtgcaggaactttagcattgatggatgcaggt
gttcaaatcaagaaaccggtttctggtattgcaatgggattggtaactgatgtaaaatca
ggaaaattcactgtactttctgacatcttgggtgatgaagatcacttgggagatatggac
tttaaagtaaccggaacagcagatggaatcaccgcttgtcagatggacatcaagattcaa
ggattgtcgatggacattatggaaaaagcgcttctacaagctagagacggaagattacat
attcttgataaattaaacgagacaatttctgctccaagagaagacgtgaaacctcacgct
ccgaaaatggtaatgcttgagatctctaaagatttcatcggtgcagttatcgggcctggt
ggaaaaatcattcagcaaatgcagaaagatactgatactgttatcgcaattgaagaagtt
ggcgaaatcggtagaattgaaatttctggtgttagcagagagaaaatcaacgaagcgatt
gcaagaatcaacgagattacttttgtaccaactgtaggtgaagtttaccaaggtaaagta
gtaaaagtgatggattttggagcattcgtagcgattgcaaaaggtactgaaggtctactt
catatctctgaaatcgaatgggctcgtctagacaaagttccttacaaagaaggtgacgaa
gttgaggtgaaatttatgggttatgatgaccgtaaaaaaatgaaactttctagaaaagtt
ttattgccaagaccagaaagaccggcacaaaagccaagaaatgaaggtaacgtaaatcct
gaaggtaaagaccaaccgggagaacacaagcctttgaatgaagcttaa
DBGET
integrated database retrieval system
