Chryseobacterium sp. Y16C: MKS83_00290
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Entry
MKS83_00290 CDS
T11021
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt02024
Quorum sensing
chrt03060
Protein export
chrt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MKS83_00290 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MKS83_00290 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MKS83_00290 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
chrt02044
]
MKS83_00290 (secD)
Secretion system [BR:
chrt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MKS83_00290 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
DUF3165
Motif
Other DBs
NCBI-ProteinID:
UMQ42137
LinkDB
All DBs
Position
71777..74689
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AA seq
970 aa
AA seq
DB search
MQGKGLITIVAIVLGLICLNELLPTWYASKIEKQATAIAGDNPEKYQKEIAKLSKDTLNL
GFTKLYYTKAKDKEMKLGLDLKGGINVLLEINQRDLVNDLTNYSTNPVLIEALNKTDEAQ
KNSTKAYIDNFFEQFDAVNKAKGTNLKLADPEIFGNTTLTEVKYNTPDEQVKSIVKRKID
ASVGTAFEVIRTRIDKLGAIQPNVQRVPGTARISVEMPGMKDIDKVKKMLQTSAKLQFWE
VQQITEIAPYFQTLSTMVAAKGDSMGVAKNTNFANIIQGGKSMSPSAVGSVKLSDTAVVN
KILNSKVAQSLRPANIKYTQFMWGYKPEATDAESLVLYAIRGNINQKAPVDGAVETANIS
YDELSRIVVDMQMDSKGAKEWKTLTEKNVGKPVAVTLDGRVYTAPNVVGAIPNGRTQISG
NFSQEEAKELVDVLGAGKLPAGAKVVQATVVGPSLGQESIDAGLMSFMIAFAIIIVYIIF
YYGGAGVYAVIAMVINLFYIFGIMDSGDFTLTLPGIAGIVLTMAVAVDTNVIIYERTKEE
LFAGKSILEAYKDGFKHALNAIIDGHTTTFLTAVVLFFFGTGPIKGFALTLMIGVAMTLF
TSVLLSRVMIFSRLNKGKGLSVWTPATKNLFRNTWIDFIGKRKYAYIFSAVLTLVCIISI
ATHGFKYGIDFTGGRNYVVRFDKDVKAEDVEDKLVALFKTEDGKNSSVEAKTFGSNNQLK
ISTDYLIEDESLKADQIIEQKLFEGLKANLPAGTTLKDFKSADKEHAGIISSEKVGPSVA
DDIKIHGIYAVLGALGIIFIYILLRFRKWQFSLGAVAALFHDAVIILGAYSLLHKYMPFN
MEINQDFIAAILTVLGYSINDTVIIFDRIREYLREKKSLTLAGLFDDSISSTLGRTFNTS
FTTILVILAIFIFGGDNLRGFMFAMLIGIGFGTYSSIFVASAIAYDFLKKGKEEEVHGKS
TSNKEVLASK
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaaaggacttattacaattgtcgctattgtactagggttgatttgcttaaat
gagctattaccaacttggtacgccagcaaaattgaaaagcaggcaactgctattgcagga
gacaatccggaaaagtatcagaaagaaattgcaaaactttctaaggatactctgaacctg
ggattcacaaaactttattacactaaagccaaagacaaggaaatgaaacttggtcttgac
ttgaaaggagggatcaacgttcttttggaaatcaaccaaagagatcttgtgaatgattta
acaaattattctaccaaccctgttcttattgaggctttaaacaaaactgatgaagcacaa
aagaattctacaaaagcttacatcgacaatttcttcgaacagtttgatgctgtaaacaaa
gctaaaggtacaaacctgaaattggcagatcctgaaatcttcggaaatacaacccttact
gaggtgaagtacaatacaccggatgaacaggtaaaaagcatcgtgaaaagaaagatcgat
gcatctgtaggaacagcttttgaagtaatcagaacgagaattgataagttgggtgcaatt
cagccgaatgttcagagagtacctggaactgctagaatttctgtggaaatgccgggaatg
aaagacattgacaaagtaaagaagatgcttcagacttctgcaaaacttcaattctgggaa
gtacagcaaatcactgaaattgctccttatttccaaacattgagcacaatggtagctgca
aaaggagattctatgggtgttgcaaaaaacacaaattttgcaaatatcatccagggagga
aaatctatgagtccaagtgcggttggaagtgtaaaattatctgatacagctgttgtaaac
aaaattttaaacagcaaagtagctcagtctttacgtccggctaacattaaatatacccaa
tttatgtgggggtacaaacctgaggctacagatgctgaaagcttggtactgtatgcaatt
agaggtaacatcaaccaaaaagctccagtagacggtgctgttgaaacggctaacattagt
tatgatgagctaagcagaatagtagtagacatgcagatggattctaaaggggctaaagaa
tggaaaacattaacagagaaaaacgttggtaaaccagttgcggtaacattggatggtaga
gtttatactgctccgaatgttgtaggtgcaattcctaacggtagaactcagatttctggt
aacttctctcaggaagaagctaaagaattggtagacgtattaggagcaggtaaattacct
gcaggtgcaaaagtggttcaggctacagttgtagggccatctttaggacaagaatctatt
gatgcaggtctgatgtcattcatgattgcatttgctattattatcgtttatatcattttc
tactatggtggagcgggtgtttatgcggtaattgcaatggttattaacttattctatatt
ttcggtattatggattcgggagatttcactcttacccttcctggtatcgcgggtatcgtt
ttaacgatggcagttgctgtcgatacaaacgttatcatctatgaaagaacaaaagaagaa
ttatttgcaggcaagagtattcttgaagcttacaaagatggtttcaaacatgcgttgaat
gcgattatcgatggtcacacaactactttcttaacggcggttgtattgttcttcttcgga
acaggacctatcaaaggtttcgctttgaccttgatgattggggttgcaatgacattattt
acgtctgtattgctttcgagagtaatgatcttctcaagattaaataaaggaaaaggactt
tctgtttggactcctgcaacaaagaacctattcagaaatacttggatcgatttcatcgga
aaaagaaaatacgcttacattttctctgctgtgttaacgctggtttgtatcatttcaatt
gcaactcacgggttcaaatatggtattgattttaccggaggtagaaactatgtggtaaga
tttgataaagacgttaaagctgaagatgttgaagataaattagtagcattattcaaaact
gaagatggaaagaattcttctgttgaagctaaaacttttggaagcaataatcagttgaag
atctctacagattaccttatcgaagatgaatctttaaaagctgaccaaatcattgagcaa
aaattgttcgaaggattaaaagcaaacttacctgcaggaactacattgaaagatttcaaa
tctgcagataaagaacatgctggaattatttcttctgaaaaagtaggaccttccgtagca
gatgatattaaaattcacggtatttatgcagttttaggagcattaggaattatctttatc
tatatcttattgagatttagaaaatggcagttctctttgggtgcggttgctgcactattc
catgatgccgtaatcattttgggagcgtattccctgcttcataaatatatgccgttcaac
atggagatcaaccaggatttcatcgctgcgatcctgacggttttagggtactcaatcaac
gatacggtaattatcttcgacagaattagagaatacttaagagagaaaaaatctttaaca
ttagctggactatttgatgattctatttctagtacattgggtagaacattcaacacctca
tttactacaattttagtaatcttggcaatcttcattttcggtggagataacttgagagga
tttatgtttgcgatgttaattggtatcggattcggtacttactcatctatcttcgtggca
tcggcgattgcttatgacttccttaaaaaaggaaaagaagaggaagtacatggtaaatct
acttcaaacaaagaagtacttgcttcaaaataa
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