Chryseobacterium sp. Y16C: MKS83_00520
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Entry
MKS83_00520 CDS
T11021
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt03030
DNA replication
chrt03430
Mismatch repair
chrt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKS83_00520 (holA)
03430 Mismatch repair
MKS83_00520 (holA)
03440 Homologous recombination
MKS83_00520 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrt03032
]
MKS83_00520 (holA)
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_00520 (holA)
Enzymes [BR:
chrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKS83_00520 (holA)
DNA replication proteins [BR:
chrt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKS83_00520 (holA)
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKS83_00520 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
DUF3201
Calici_coat
Motif
Other DBs
NCBI-ProteinID:
UMQ42183
LinkDB
All DBs
Position
120507..121544
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLILKNIKNKEVLPIYFFHGEEPYFIDLAVKALEHDFLNEDEKAFNQTVVYGKDTS
YQEVLSLARQFPMMGDKQVIIVKEAQDLKLNEEENRILEAYVVNPVPSTVLVFAHKHKKL
DSRKKVTKALDKANALFLSESIRENNLPKWIADECIALGIKTAPNISHLLAEYLGNDLSR
IANELNKLKIILKEGEVLDGKIIEDHIGISKEYNVFELQKALGTKNANAAFKIAHFMGKN
PKNNPFVMMLASLYNYFSNVIIYNTMAGQSPQAIASQMGVNPYFIKDYAESARLYPLKHA
TRVISILREFDMKGKGLGAVNMSEAELIKELVYKIINVDKIKMKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaaatattaaaaataaagaagttttacctatttat
tttttccacggagaagaaccttactttatagatcttgcggtaaaagccttagaacatgac
tttttgaatgaagatgaaaaagcattcaaccaaacagtggtatacggaaaagatacctct
tatcaggaagttctttcgctggcaaggcagtttccgatgatgggagacaagcaggtaatt
attgtaaaagaagcgcaggatttaaaattaaatgaggaggaaaacaggattttggaagct
tatgtagtgaatcctgttccatctaccgtgctggtttttgctcataaacataaaaaatta
gacagcagaaaaaaagtaacgaaagcgttggataaagccaatgcattatttttaagtgag
tccatcagagaaaataaccttccgaaatggattgctgatgaatgtattgctttaggcata
aaaaccgcgcccaacatctctcatcttttggcagaatatctaggaaatgacctttccaga
atagccaatgaactgaataaacttaaaatcattcttaaagaaggggaagtactggacgga
aagatcattgaagaccacatcggaatcagcaaggaatataatgtttttgaacttcaaaaa
gctctgggaacaaaaaatgccaatgctgcgttcaaaattgctcattttatgggaaaaaat
cctaagaacaatccttttgtgatgatgctggctagtctatataattatttctctaatgtc
attatttacaatacaatggcgggtcaatcaccacaggcaattgcctctcaaatgggagta
aacccgtatttcatcaaagactatgcagaatcggcaagattatatcctttaaagcatgct
acaagagtgatctctattttaagggaattcgatatgaaaggaaaaggattgggagcagtc
aatatgagtgaagcggaacttattaaagagctggtttacaaaattataaatgttgataag
attaagatgaaagtatga
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