KEGG   Chryseobacterium sp. Y16C: MKS83_01900
Entry
MKS83_01900       CDS       T11021                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
chrt  Chryseobacterium sp. Y16C
Pathway
chrt03030  DNA replication
chrt03430  Mismatch repair
chrt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chrt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MKS83_01900
   03430 Mismatch repair
    MKS83_01900
   03440 Homologous recombination
    MKS83_01900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chrt03032]
    MKS83_01900
   03400 DNA repair and recombination proteins [BR:chrt03400]
    MKS83_01900
Enzymes [BR:chrt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MKS83_01900
DNA replication proteins [BR:chrt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MKS83_01900
DNA repair and recombination proteins [BR:chrt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MKS83_01900
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 DEDDh_C
Other DBs
NCBI-ProteinID: UMQ42452
LinkDB
Position
complement(469247..469801)
AA seq 184 aa
MDFCAIDFETATFDRHSACELGICVVQDSKIVETKTWLIKPPSFPYFSQRNIDVHGILPD
DVKDAPTFEDIWYEVEEMMYGTLMIAHNASFDANVLRSCLDYYGMFTPKLNYLCSIQLAK
KSWNYLPRYGLKHLAEYHQIKFNHHRAGDDAEVCAKISLLAFEKLFLTSNEEISEYMKAK
IKKL
NT seq 555 nt   +upstreamnt  +downstreamnt
atggatttctgcgcaatagattttgaaaccgctacttttgaccgacactccgcttgtgag
ttgggaatttgcgtagtgcaggattcaaaaatcgtagaaacgaaaacatggttgatcaaa
cctccgagcttcccctatttcagtcaaagaaatattgatgtacacgggattttacccgac
gatgtgaaagatgctccaacttttgaagatatttggtatgaagtggaggaaatgatgtac
ggaacattaatgattgcccataatgcgagttttgatgcaaatgttttgcggagctgcctg
gattattacggaatgtttactccgaaattaaactatctgtgtagtattcagttggcaaaa
aaatcatggaattatcttcccagatatggtttaaagcatttggcggaataccatcaaatc
aaattcaaccatcacagagcaggagacgatgcagaggtttgtgcaaaaatatctttatta
gcttttgaaaaactgtttctcaccagtaatgaagaaatttcggaatacatgaaagctaag
atcaaaaaactttga

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