Chryseobacterium sp. Y16C: MKS83_02030
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Entry
MKS83_02030 CDS
T11021
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt02024
Quorum sensing
chrt03060
Protein export
chrt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MKS83_02030 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MKS83_02030 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MKS83_02030 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
chrt02044
]
MKS83_02030 (ffh)
Enzymes [BR:
chrt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
MKS83_02030 (ffh)
Secretion system [BR:
chrt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MKS83_02030 (ffh)
Eukaryotic Sec-SRP protein
MKS83_02030 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
SRPRB
cobW
AAA_22
CLP1_P
nSTAND3
CbiA
ATP_bind_1
KAP_NTPase
APS_kinase
ATPase
AAA_18
AAA_24
ResIII
AAA_19
AAA_16
AAA_31
SLFN-g3_helicase
AAA_33
NPHP3_N
6PF2K
RRM_Nup35
DO-GTPase1
NACHT
AAA_14
MMR_HSR1
KTI12
TsaE
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
UMQ42477
LinkDB
All DBs
Position
complement(494021..495382)
Genome browser
AA seq
453 aa
AA seq
DB search
MFNSLQDKLDKALHNISGRGKITEINVAETVKEIRRALVDADVNYKVAKDLTKRVQDKAL
GQDVLTSLTPGQLMTKIVHDELVDLMGGSQEGINLSGKPSVILIAGLQGSGKTTFSGKLA
NYLKTKRNKKPLLVACDVYRPAAIDQLKVLGGQIGVPVFTEEGSMDPSSISQNAINFAKS
NGHDVVIVDTAGRLAIDEQMMKEIKTVHSTITPNETLFVVDSMTGQDAVNTAKAFNDALN
FDGVVLTKLDGDTRGGAALTIRSVVEKPIKFISTGEKMEALDLFYPERMADRILGMGDVV
SLVERAQEQFDEEEAKKLHKKIAKNEFGFDDFLKQINQIKKMGNMKDLMGMIPGVGKAIK
DVEISDDAFKHIEAIIYSMTPEERRKPSIINTQRKNRIAKGAGRKIEDVNQLMKQFDQMG
KMMKMMQGPQGKQMMQMMSKMPNMPGMGGMFGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatagtttacaggataaattagacaaagcgcttcataatatttcaggacgtgga
aagatcacggaaatcaatgttgcggagaccgtaaaggaaattcgtagagcattggtagat
gccgatgttaattataaagttgcaaaagatcttactaaaagagttcaggataaagcttta
gggcaggatgttcttacttccctaacgccgggacaattgatgacgaagattgttcatgac
gaattggtagatttaatgggaggttctcaggaggggatcaacctttccggaaaaccttct
gtaattttgattgcaggtcttcagggttccggtaaaactactttctcaggaaaattagct
aattatttaaagacaaaaagaaataaaaaacctcttttggttgcttgtgacgtttatcgt
ccggctgcaatcgatcagctgaaagttttaggtggacagatcggggttcctgttttcacg
gaagaaggttctatggatccttcaagcatctctcaaaacgctattaattttgctaaatct
aacggtcatgatgttgtaatcgtcgatactgcaggtcgtttggcgattgatgagcagatg
atgaaggaaatcaaaactgttcattctacgattacgccaaacgaaacattgttcgttgtt
gactcaatgacaggtcaggatgctgtaaatacagcaaaagcattcaacgatgctttgaat
tttgacggagttgttttaactaaattggatggtgatacccgtggtggggctgcattgacg
atccgttcggtagttgaaaaaccaatcaaatttatctctacaggagaaaaaatggaagct
ttagatcttttctacccggaaaggatggcagacagaatcctgggaatgggagacgttgtt
tccttggtagaaagagctcaggagcagtttgatgaagaagaagcaaaaaaacttcataag
aaaatcgctaagaatgagtttggttttgatgatttcttgaagcaaatcaatcaaatcaaa
aagatgggtaacatgaaggatttgatgggaatgattccgggagttggtaaagcaattaaa
gatgtagagatcagcgatgatgcttttaaacacattgaagcaatcatctactctatgact
cctgaagaaagaaggaaaccttccattatcaatactcagagaaaaaacagaattgcgaaa
ggtgcgggaagaaaaatcgaagatgtaaatcaattgatgaaacagttcgaccaaatgggt
aaaatgatgaagatgatgcagggacctcagggaaaacaaatgatgcagatgatgagcaaa
atgccaaatatgcctggaatgggcggaatgtttgggaaataa
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