Chryseobacterium sp. Y16C: MKS83_02510
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Entry
MKS83_02510 CDS
T11021
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MKS83_02510 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MKS83_02510 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
UvrA_inter
UvrA_DNA-bind
AAA_21
AAA_16
AAA_29
nSTAND3
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_14
nSTAND1
Viral_helicase1
AAA_22
AAA_18
AAA_33
AAA_23
NACHT
ATPase_2
SLFN-g3_helicase
cobW
NB-ARC
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UMQ44236
LinkDB
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Position
complement(595130..597922)
Genome browser
AA seq
930 aa
AA seq
DB search
MASTTDIDIKKQIFVKNAHLNNLKHIDVIIPKNKLIVITGVSGSGKSSLAFDTIYAEGQR
RYVESLSSYARQFLGKLEKPKVDDIKGLAPSIAIQQKVISSNPRSTVGTSTEIYDYMKLL
FARIGKTFSPVSGEEVKKDSVSDVVDFIKASKKDTSFLLTAPYEYDIANFGENLNVLKLA
GFTRLEINGNVAGIEDLESFGFTPEKGMEINLVIDRFSYEEDESFLQRLADSIQMAFYEG
RGYCALKNIETGKIKEFSNKFELDGIEFLEPNVHFFSFNNPYGACPTCEGYGKVIGIDED
LVIPNKTLSIFEDAVASWKGESMSEWKKDFIKKAKDFPIHKPYHQLTKEQRTYLWKGDGN
KTFPSVNNFFQMLEENLYKIQYRVMLSRYRGKTLCPTCEGLRLREETSWVKIDGHNIQSM
IELPLDELFPLIKDLKLSDHDQEVAKRLLYEITTRLEFLLKVGLGYLTLNRTSNTLSGGE
SQRINLATSLGSSLVGSIYILDEPSIGLHSRDTENLIEVLQNLRDLGNTVIVVEHDEDVM
RAADYIIDIGPEAGYLGGELVFAGDYKELKDADTLTSKYLTGRLEIEIPAKRRKAKEWIH
IKGARQNNLKNIDVDVPLESLVVISGVSGSGKSTLMKEILTNDIQIQLGMGGKKGDYDSV
EFPKKLIKHIELIDQNPIGKSSRSNPVTYLKAYDDIRDLFAKQKVAKMMGYKPKHFSFNV
DGGRCDECKGEGVINVSMQFMADIELECEVCKGTRFKNEILEVKYDEKNISDILHMTVDE
ALEFFKDNHEDKIVTKLRPLQDVGLGYLQLGQSSSTLSGGEAQRVKLASFLVKGVTTDKT
LFIFDEPSTGLHFHDVQKLLKSLQALIDLGHSVIVIEHQPDIIKCADYIIDIGPEAGKYG
GEVVFAGTPEDLAKNKKSHTAKYIKEKLEN
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaactacagatatagatattaaaaaacagatttttgttaagaatgcacacctt
aataatctgaaacacatagatgtaatcatccctaaaaataaattaattgtcatcacagga
gtttccggaagcggaaaatcttcgctggcttttgataccatttatgcagaaggacagaga
cgctatgttgagagtttaagctcttatgcacgtcagtttttgggaaaacttgaaaaaccg
aaagttgatgacattaaagggttggctccttccattgccattcagcagaaggtaatttct
tcaaacccccgttcaacggtcggaacttcaacggagatttacgattatatgaagcttctc
tttgcaagaatcggtaaaacattttctcctgtttccggtgaagaagtgaaaaaagattcg
gtttctgatgtagtggattttattaaagcttctaagaaagatacttcttttttactaacg
gctccctatgaatatgacattgcaaattttggagaaaacttaaatgttttaaaactggct
ggattcacaagactggaaatcaacgggaatgttgccggaattgaagatttggaaagtttt
ggctttacccctgaaaaaggaatggagatcaatctcgtaatcgaccgtttttcttacgaa
gaagatgaaagttttcttcagcgattagcagattccatccagatggcattctatgaaggt
cgaggctattgtgctctaaagaatattgagaccggaaaaattaaagaattttcaaataag
tttgagcttgacggaatcgaatttttagaaccgaatgtccatttctttagttttaataat
ccatacggagcctgtcctacctgtgaaggttatggaaaagtaatcgggatagatgaagat
ttagtcattccgaataagacattatccatttttgaagatgccgttgcttcctggaaagga
gaaagtatgagcgaatggaaaaaagattttataaaaaaagcgaaagattttcctatccat
aaaccttatcatcaacttactaaagagcagagaacttatctttggaaaggtgacggaaac
aaaacatttccatcagtaaacaacttcttccaaatgctggaggaaaatttatataaaatc
cagtatcgtgtaatgctttccagatatcgtggtaaaacactttgcccgacttgtgaaggg
ttaagattacgtgaagaaacaagctgggtgaaaatcgacgggcacaatatccagtcgatg
attgagcttcctttagatgagctttttccgttaataaaagacttaaagctatctgatcac
gatcaggaggtggcgaaaagactcttatatgaaatcactacccgacttgaatttttatta
aaagtggggttaggatatttaacgttgaacagaacctccaataccctttcgggaggagaa
agccagagaatcaacctggctacaagcttgggaagctctttggtaggatcaatttatatt
ctggatgaaccttcaatcggtttgcactccagagatacggagaatctgattgaagtattg
cagaatcttcgtgatctcggaaatacagtaattgtagtagaacacgatgaagatgtgatg
agagcagccgattatatcattgatattggtccggaagcggggtatttgggaggtgaactt
gtttttgctggtgattataaagaactgaaagatgcggacactttaacctcaaaatatctg
acgggcagactggagattgagatacctgcgaaacgtagaaaagctaaagaatggatccat
attaaaggggcgcgtcagaataaccttaaaaatattgatgtagatgttccgttagaaagt
cttgttgtaatttcgggagtttcgggaagcggtaaatctactttaatgaaagaaattctt
accaacgatatccagatccagttaggaatgggcggtaaaaaaggagattatgattcagta
gaatttcctaaaaaactcatcaaacatattgaactgatcgatcagaaccctatcgggaaa
tcttcaagatccaaccctgtaacctatctgaaagcgtatgatgatatcagagatttgttt
gctaagcaaaaagtagcaaaaatgatggggtataaacctaaacatttttcgtttaacgta
gacggcggaagatgtgatgaatgtaaaggagaaggtgttattaatgtttccatgcagttc
atggctgatattgagctggaatgtgaggtttgtaaaggaacccgttttaaaaatgaaatt
cttgaagtgaaatacgacgagaagaacatttcggatattcttcacatgacggttgatgaa
gctttggaattttttaaagataatcatgaagataaaatcgttactaaattaagaccttta
caggatgtcggtttagggtatttacagttgggacagagctcttctaccctttccggtggt
gaggcacaacgtgtaaagttggcttcattccttgtaaaaggagttactacagacaaaaca
ttatttattttcgatgaaccttctacagggcttcatttccatgatgttcagaaattacta
aaatccttacaggcattaattgatttaggccattcagtgatcgttattgagcatcagccg
gatatcattaaatgtgcagattacatcattgatattggcccggaagcaggaaaatacggt
ggtgaagttgtctttgcgggaaccccggaagatttggcaaaaaataaaaaatctcataca
gcaaaatacattaaggaaaagctggaaaactaa
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