KEGG   Chryseobacterium sp. Y16C: MKS83_03755
Entry
MKS83_03755       CDS       T11021                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
chrt  Chryseobacterium sp. Y16C
Pathway
chrt00010  Glycolysis / Gluconeogenesis
chrt00020  Citrate cycle (TCA cycle)
chrt00260  Glycine, serine and threonine metabolism
chrt00280  Valine, leucine and isoleucine degradation
chrt00310  Lysine degradation
chrt00380  Tryptophan metabolism
chrt00620  Pyruvate metabolism
chrt00630  Glyoxylate and dicarboxylate metabolism
chrt00640  Propanoate metabolism
chrt00670  One carbon pool by folate
chrt00785  Lipoic acid metabolism
chrt01100  Metabolic pathways
chrt01110  Biosynthesis of secondary metabolites
chrt01120  Microbial metabolism in diverse environments
chrt01200  Carbon metabolism
chrt01210  2-Oxocarboxylic acid metabolism
chrt01240  Biosynthesis of cofactors
Module
chrt_M00009  Citrate cycle (TCA cycle, Krebs cycle)
chrt_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chrt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
chrt_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:chrt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MKS83_03755 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MKS83_03755 (lpdA)
   00620 Pyruvate metabolism
    MKS83_03755 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MKS83_03755 (lpdA)
   00640 Propanoate metabolism
    MKS83_03755 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MKS83_03755 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MKS83_03755 (lpdA)
   00310 Lysine degradation
    MKS83_03755 (lpdA)
   00380 Tryptophan metabolism
    MKS83_03755 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MKS83_03755 (lpdA)
   00670 One carbon pool by folate
    MKS83_03755 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:chrt04147]
    MKS83_03755 (lpdA)
Enzymes [BR:chrt01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MKS83_03755 (lpdA)
Exosome [BR:chrt04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MKS83_03755 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 GIDA NAD_binding_8 HI0933_like FAD_binding_3 AlaDh_PNT_C DAO Lys_Orn_oxgnase 3HCDH_N Thi4 IFT46_B_C MSSS TbsP_N NAD_binding_7
Other DBs
NCBI-ProteinID: UMQ42810
LinkDB
Position
complement(858176..859579)
AA seq 467 aa
MSQFDVTVIGSGPGGYVAAIRAAQLGFTTAIIEKYPTLGGTCLNVGCIPSKALLDSSEHF
ENAKHNFASHGIIINEPQADIARMIERKNEVVKQNTDGINYLMNKNKITVFEGVGSFESA
TQIKVTKNDGSTETIESKYTIIATGSKPSTLPFITLDKERVITSTEALNLKEIPKHLVVI
GGGVIGLELGSVYLRLGAQVTVVEFMDKIIPGMDGALSKELTKVLKKQGMKFMLSTAVSA
VERNGDTVKITAKDKKGEEVTVEGDYCLVSVGRKPYTEGLGLEKAGVELDERGRVKVNDH
LQTNVANIYAIGDVIKGAMLAHKAEEEGVFVAETLAGQKPHINYNLIPGVVYTWPEVAGV
GKTEEQVKEEGVAYKVGSFPMRALGRSRASGDVDGLVKIIADEKTDEVLGMHIVGARAAD
LIAEGVIAMEFRASAEDIARSSHAHPTYAEAIKEAALDATAKRPIHM
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgagtcaattcgatgttaccgtaatcggttctggtcctggaggttatgttgccgcaatc
cgtgctgcacaattaggtttcacaacagcaattattgaaaaatatcctactttaggagga
acttgccttaatgttgggtgtattccgtcaaaagcgcttttggatagctctgaacatttt
gaaaatgcaaagcacaatttcgcaagtcacggaatcattatcaatgagcctcaggcagat
atcgcaagaatgatcgagcgtaaaaatgaggtggtaaaacaaaatacagacggaatcaat
tacctgatgaacaaaaacaaaatcactgtttttgaaggagttggaagcttcgaatctgca
actcagatcaaagtaacgaaaaacgacggttctactgaaacgatcgaatctaaatatacc
atcattgcaacaggttctaaaccatctactttacctttcatcactttagataaagaaaga
gtaattacttctacagaagctttaaatcttaaggaaattcctaagcatttggtagtgatc
ggtggtggagttatcggtcttgaattaggttctgtttatttaagattaggagctcaggta
actgtggttgagtttatggataaaatcatccctggaatggatggagctttaagtaaagaa
ttaactaaagttcttaaaaagcaaggaatgaaattcatgctttctacagcagtttctgca
gtggaaagaaacggagatactgtaaaaattactgccaaagataaaaaaggagaagaggta
actgttgaaggagattattgtttggtttctgtaggtagaaaaccttatactgaaggtctt
ggactggagaaagcgggtgttgagcttgacgaaagaggaagagtaaaggtaaacgatcat
cttcagactaacgttgctaatatctatgcgatcggagacgttatcaaaggagcaatgttg
gctcacaaagctgaagaagaaggagttttcgttgctgaaacattggcaggacaaaaacct
cacatcaattataatttaattccgggagttgtttatacttggcctgaagttgcaggggtt
ggtaaaactgaagagcaagtgaaagaagagggggtagcttacaaggtaggatctttccct
atgagagctttaggaagaagccgtgcaagtggcgatgtggacggtttggttaaaatcatt
gcagatgaaaaaacggatgaggttttaggaatgcacattgtaggagcaagagctgcagac
cttattgcagaaggagttattgcaatggaattccgtgcaagtgctgaagatattgcaaga
agttctcacgctcacccgacttatgcagaagcaattaaagaagctgcattggatgctaca
gcgaaaagacctattcatatgtaa

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