Chryseobacterium sp. Y16C: MKS83_03770
Help
Entry
MKS83_03770 CDS
T11021
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKS83_03770 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrt03019
]
MKS83_03770 (recQ)
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_03770 (recQ)
Enzymes [BR:
chrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MKS83_03770 (recQ)
Messenger RNA biogenesis [BR:
chrt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MKS83_03770 (recQ)
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MKS83_03770 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Motif
Other DBs
NCBI-ProteinID:
UMQ42813
LinkDB
All DBs
Position
complement(861644..863848)
Genome browser
AA seq
734 aa
AA seq
DB search
MSAKKANLSGELKKYFGFSTFKGQQEQIIENLLNGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSDDGVAHVLNSSLNKTQTKQVFDDIKSGKTKLLYVA
PESLIKEDYLDFLKEVKISFFAIDEAHCISEWGHDFRPEYRNLKSIIDKIADVPVIALTA
TATPKVQDDIQKTLGMSSALVFKESFNRPNLYYEVQPKVNVDKEIVKFINQHKGKSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKIRVANQDKFLMEEVDVIVATIAFGMGIDK
PDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGENFDPVNGEGAKMCDNSSNPPKLKDATDDLKKV
LELIKDTGEKFKAKDLISVIAGKETAVTKSYKLEQSSYFGFGKQEKDNHWKTILRQATVQ
NFLQKDIETYGVLKIAEKGRLVLEGKLEHSFLIAEDREFDLTQAKAESDQIQQQSGGGLD
QNLFTLLKDLRKKVAKKHGIPPYTVFMDPSLEDMTVQYPITVEEITKIYGVGEGKAKKYG
KEFADFISKYVEDNNIERTQDMVLKQVANKSSHKVFIIQSTDKKIDLEDIARAKNLSMDE
LLKEMERIVYQGTKLNIDYYIEDNFDEDIVDGFMEFMNESESDSMKVLLDEFGDELSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaaaaagccaatttatcaggcgaattgaaaaaatatttcgggttttctact
tttaaaggacaacaagagcaaattatagaaaacctgttgaatgggaaggatatatttgtg
ttgatgcctacaggaggaggaaaatccttatgttatcagcttccggcacttatttcggaa
ggtacggcaatagtagtttcgccgttaatagcgttaatgaaaaaccaggtagatgcagtg
aacggactttcatctgatgatggagtagcccatgttcttaattcatctttaaataagaca
cagaccaaacaggtctttgatgatattaaaagcggtaaaaccaaacttctttatgtcgct
cctgaatctttaattaaagaggattatttggactttttgaaagaagtgaaaatttctttc
tttgctatagatgaagcccactgtatctcagaatggggacatgatttcagaccggaatac
cgaaatttgaaatctattatcgataaaattgcagatgttcctgtaattgctttaactgca
actgcaacgcctaaagttcaggatgatatccagaagactttgggaatgagcagcgctttg
gtctttaaagaaagtttcaacagaccgaatctttactatgaagtacaacccaaagtaaat
gtagataaggagattgttaaattcattaatcagcacaaaggaaaatcaggaattgtgtac
tgtttaagccgaagaaaagtggaagaatttgcacagcttttgcaggtaaacggaatcaat
gctttgccttatcatgctggtcttgatcagaaaataagagtcgccaatcaggataaattc
ctgatggaagaagtggatgtgattgtagcgacaattgcttttggaatgggaatcgataaa
ccggatgttcgttttgtgattcattatgattttccgaaatctttagaaagctattatcag
gaaacaggacgtgcaggaagagatggaggagaaggacattgtctggcgttctatgatcct
aaagatattgaaaagttagaaaagtttttagctcaaaagcctgtttctgaacgagaaatc
gggttgcagcttctgaatgaagtggtaggttatgccgaaacttcaatgagcagaagacaa
tatattctgtattattttggtgagaactttgatccggttaatggggaaggcgccaaaatg
tgtgataattcatcgaatcctccaaagctgaaagatgctacagatgacttgaaaaaagta
ctggagcttattaaagataccggagagaaattcaaagcaaaggatctaatttctgtaatt
gctggaaaagaaacagcagtgacaaaatcatataaattggagcagagttcttatttcggt
tttggaaaacaagaaaaggataatcactggaaaactattctacgacaggcaacggttcag
aattttctgcaaaaggatattgaaacctatggcgttttaaagattgctgaaaaagggaga
ctggtattagaaggtaaattagaacattcattcttaattgctgaagaccgggaattcgat
ttgactcaggctaaagcggagagtgatcagattcaacagcaatccggaggcgggttagat
cagaatttatttacgttattaaaagatttaagaaaaaaagtagccaaaaaacacggaatt
cctccttacacagtattcatggatccgagcttggaagatatgacggttcaatacccaatt
acggttgaagaaattacgaaaatttatggagtcggtgaagggaaagctaaaaagtatggt
aaagaattcgctgattttatcagtaaatatgtagaagataacaatatcgaacgtactcaa
gatatggtattgaagcaggtggctaataaatccagtcataaggttttcattattcagagt
actgataaaaaaattgatcttgaagatattgcaagagccaaaaatctttcgatggatgaa
ttgttgaaagaaatggaacgtattgtttatcagggaacaaaattgaacatcgattattat
attgaagataattttgatgaagatattgtagacggcttcatggaatttatgaatgaatcc
gaaagtgacagcatgaaggttttgcttgatgaattcggagatgagctttctgatgaagaa
gtgagaatgttgagaataaaattcatcagcgacgttgctaattaa
DBGET
integrated database retrieval system
