Chryseobacterium sp. Y16C: MKS83_05205
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Entry
MKS83_05205 CDS
T11021
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt03030
DNA replication
chrt03430
Mismatch repair
chrt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKS83_05205 (dnaE)
03430 Mismatch repair
MKS83_05205 (dnaE)
03440 Homologous recombination
MKS83_05205 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrt03032
]
MKS83_05205 (dnaE)
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_05205 (dnaE)
Enzymes [BR:
chrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKS83_05205 (dnaE)
DNA replication proteins [BR:
chrt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKS83_05205 (dnaE)
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKS83_05205 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UMQ43089
LinkDB
All DBs
Position
complement(1194453..1197497)
Genome browser
AA seq
1014 aa
AA seq
DB search
MFLNCHSFHSLRYGTLSIDDLISQALALGVKELVLTDINTVTGVYEFKKKCEENNIRPIV
GVEVRNGSELYYIAIAKEFSGLAEVNKMLTSYNCDKIDLPLQPELAYNFILYPLSNIPDN
LQENEYVGIYEDEINLLIRPEYNKLLSKMVILCPITFSTKKEYNLHRILRAIDNNTLLSK
LAEKEVCRKSEYFRSVDSIHRIYRHYPEIIQNTQKLLSKCSFDFVFSTPRNRKHYTGTKA
DDLKLLTRLAYAGLERRYGRNHEVATKRIEKELKVIDELNFSGYFLITWDIIRYSNSMGF
MHVGRGSGANSIVAYCLEITDICPIELDLYFERFLNLNRKSPPDFDIDWSWQERDIILDY
IFNRYGKEYVAFCGTNVEFKYRSIIREVGKAFGLPKEELDELSKYPERVFRDDIVKQVQK
YGKLLEKFPNQRSMHSCGIIISEEPLTNFTALEMPPKGFPIVQWDMHVAEEIGFEKFDIL
SQRGLGTINDTVRLLEEKRGIKVNIKDTTISKDEVKCNEYLSQGRTIGCFYIESPAMRGL
LRRLKCNNYKVLVAASSIIRPGVAQSGMMHEYIFRHNNPDKFEYFHPVFEKQLGDTYGIM
VYQEDVIKIALHYGGVSAADGDILRRAMSGKGRSLSALQKVKDDFFASCRKQGHPEELSR
EIYRQIESFAGYSFCKAHSASYAVESYQSLYLKVYYPLEFMVSAINNMGGFYRTEVYVHE
ARMSGGVILNPCVNKSEYETTIYGEEIYLGLMLLEKVESKFAQLIPKERKANGEYRSMED
FIKRVPIGIETLQTLIFIGAFRFSGVPKNELLLKARILLGDFKPEKRFQTLFEEPIKEYK
FPELKRNVFEDAFDEIEILSFPVSCTPFDLLQTKYRGTVMAKDLTEHHKKQVKMLAYLIS
RKHVPTKRGTMYFGTWIDVQGNYFDTAHFADCLEKYPFQGGGCYLLLGIVEVDFHFPTIT
ITKMAKMPFIPDPRYSHDEEKKYEAQQRIREDVSMTFRAPYPQEHEIGLPRKRF
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaattgtcattcctttcacagtcttcgttatggcacgttatccatagacgac
cttatttctcaggctttagcactgggggtaaaggaacttgttctgacagatataaatacg
gtgaccggagtttatgaatttaaaaagaaatgcgaagaaaataatatccgcccgattgtt
ggtgttgaggtgcgcaacggaagtgaattatactatatagcaattgcaaaagagtttagt
gggcttgccgaagtaaacaaaatgctgacttcttataattgcgataagattgatttacca
ttgcaaccggaattagcctacaactttatcctatatccactgagcaatattccggacaac
cttcaagaaaatgaatatgtaggaatctatgaagatgaaataaatctgttgataagaccg
gaatataacaagctgttatctaaaatggttattctttgtcccattactttcagcacaaaa
aaagaatataacctacatcggattttacgcgccattgataacaataccttgctttccaag
cttgcagaaaaagaagtgtgcaggaaatcagaatattttcgttctgtggattcaatacat
agaatttatcgtcactatcctgaaattattcagaatacgcaaaaattactttcaaaatgc
agctttgattttgtgttttccacacccagaaatagaaaacattatacaggtacaaaggcc
gatgaccttaaacttctgacccgtttagcttatgcaggattggaaagacggtacggtaga
aatcacgaggtagcaactaagcgaatcgaaaaggaactaaaggtaattgatgaactaaac
tttagtgggtactttcttatcacttgggatatcatccgatatagcaacagtatgggcttt
atgcatgttgggcgtgggagtggagcgaactctattgttgcgtactgcttggaaattacc
gatatatgccccatagagctcgatctgtattttgaacgatttctgaatcttaaccggaaa
agtccgcctgactttgacattgactggagctggcaggagcgtgatatcatccttgattat
atttttaaccgttatggtaaggagtatgttgctttttgcggaaccaatgtcgaattcaaa
taccgttcgatcattcgggaagttggaaaagcatttggacttccaaaggaggaacttgac
gagctcagcaaatatccagagcgtgtatttcgggacgatatagtaaagcaggtgcagaag
tatgggaagctgcttgaaaaatttcctaaccagcggagtatgcattcctgcgggattatt
atttccgaggaaccactcacaaactttacggcccttgaaatgcctcccaaagggtttcct
atcgtgcagtgggatatgcacgttgccgaggagatcggttttgaaaagtttgatatctta
tctcaaagagggctaggtaccatcaacgatacggtcaggcttttagaagagaagagggga
attaaggtaaatattaaggataccactatttccaaagatgaagtaaaatgtaatgaatat
ttgagccaagggcgaacgataggttgcttctatattgaatctcctgcaatgcggggatta
ttgcgcagattgaaatgtaataactataaagttttggtagccgcctcttccattattcgt
cccggtgttgcccaatcgggaatgatgcacgagtatatttttagacataacaatcctgac
aagtttgagtatttccatcctgtctttgagaagcagctaggagatacttacggcatcatg
gtataccaggaagacgtgatcaagattgcgcttcattatggtggggtgtctgctgccgat
ggagatatactgagaagagctatgagcggaaaaggtaggtctttaagtgcacttcaaaaa
gttaaggacgatttttttgcatcttgcagaaaacaagggcatccagaggaactgagccgg
gaaatttatagacagatagaatcttttgcagggtattcattctgtaaggctcactcagct
tcttatgcagtagagagttatcaatcgctgtacctgaaagtttattatccattggagttt
atggtttcggcgataaataatatgggcggtttctataggacagaggtctatgtacacgag
gcaaggatgtcagggggtgttatattgaatccatgtgtcaataaaagcgagtacgaaaca
acgatttatggagaggaaatatatctgggactgatgctgcttgaaaaagttgaatcgaaa
tttgctcagctgataccaaaggaaagaaaggcaaatggggagtataggtcaatggaagat
tttatcaagagagttccaattggtattgagactttgcagacgttgatctttattggagca
ttccgtttttcaggtgttccaaagaatgaactattgctcaaagcgcgcattctactgggg
gattttaaaccagagaaaagatttcagactctttttgaagaaccgatcaaggaatacaaa
tttccggagttaaaaagaaatgtgtttgaggatgctttcgatgaaatcgagattttaagt
tttccggtatcctgtacacctttcgatctacttcagacgaagtacaggggaactgttatg
gccaaagatcttacagaacatcacaaaaagcaggtgaagatgcttgcctatctgatttca
aggaaacatgttcctacaaaaaggggaacaatgtactttggtacctggatagatgttcag
ggaaactattttgatacagctcattttgctgactgccttgaaaaatatccatttcagggt
gggggatgctatctattattgggaattgtggaagttgatttccattttccgacaattacg
atcaccaaaatggcaaagatgccatttatacctgacccgcggtattcccatgatgaagag
aagaaatatgaagcgcaacagcggattcgggaagatgtaagtatgactttcagggcccct
tatccgcaggagcatgaaataggacttcccagaaaacgtttttag
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