Chryseobacterium sp. Y16C: MKS83_07425
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Entry
MKS83_07425 CDS
T11021
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrt Chryseobacterium sp. Y16C
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrt03032
]
MKS83_07425
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_07425
Enzymes [BR:
chrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MKS83_07425
DNA replication proteins [BR:
chrt03032
]
Prokaryotic type
DNA Topoisomerases
MKS83_07425
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MKS83_07425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UMQ43522
LinkDB
All DBs
Position
1688976..1690079
Genome browser
AA seq
367 aa
AA seq
DB search
MDNPDLDIISHLKPSKILKILKDPEASAKAVNLIYTSDTESAGIIRKKRGKKYSYFKDGE
RIKDKDEIKRINGLVIPPAWENVWICALDNGHLQATGFDVKKRKQYRYHPLWNALRNHTK
FYRMLKFGYALPAMRLHIEQDLALRNFEKRKILALIVSLMQKTNIRIGNNVYEKLYGSFG
LTTLKDKHVKIKGQKITFSFKGKKGIMHNVDLKSKRLAKLVQKCKDIPGKELFQYYDDEG
NHHSIDSGMVNEYIKEISGEDFTAKDFRTWSGTVNALIAFKEIGYAETNTEYKRKVKEAL
EMVASHLGNTSTVCKKYYVHPLVITLYENNSIKKYLDELEKIEENDGKAGLTQEEKLVLK
ILENEKM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggataatccagacttagatatcatttctcatctgaaaccttctaagatccttaaaatc
ctgaaagacccggaagcttccgcgaaagcagtaaatcttatctatacctcagatacggaa
tcagcaggtattatcagaaaaaaacggggtaaaaaatattcctatttcaaagatggggaa
agaataaaggataaagacgagatcaaaagaataaacggactggtaatacctccagcctgg
gaaaatgtatggatttgcgcattggataatggtcatcttcaggctactggttttgatgta
aaaaagagaaaacagtaccgttatcatccgctttggaatgcattgaggaatcatacgaaa
ttttacagaatgttgaaattcggatacgctttacctgctatgagacttcatattgaacag
gatttagctttaagaaattttgaaaagcggaaaatcctcgctttaattgtcagcctaatg
caaaaaacaaacatccgaattggcaataatgtctatgaaaaattgtacggttcgtttggc
ttaacaactttaaaagataaacatgtaaaaatcaaagggcaaaaaatcaccttttcattc
aaaggaaaaaaaggcattatgcacaatgttgatcttaaaagtaaaagacttgcaaaactg
gttcagaaatgtaaagatattccgggaaaggagctgtttcagtattatgatgatgagggt
aatcatcattcgatcgattccggaatggtgaatgagtatattaaggaaatcagcggtgaa
gattttacagctaaagatttcagaacatggtcgggaacggtgaatgctttaattgctttt
aaagaaatcgggtacgctgaaaccaacactgaatataaaagaaaagtgaaggaagctctc
gaaatggtggcttcccatctcggaaatacaagcacagtctgtaaaaaatattatgtccat
cctttggtcatcactttgtatgaaaacaacagcatcaaaaaatatcttgatgagctggaa
aaaatagaagaaaatgacggcaaagcgggcttaactcaggaagaaaaactggttctcaaa
atattagaaaacgaaaagatgtaa
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