Chryseobacterium sp. Y16C: MKS83_08735
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Entry
MKS83_08735 CDS
T11021
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chrt Chryseobacterium sp. Y16C
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chrt03009
]
MKS83_08735 (rimO)
Enzymes [BR:
chrt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MKS83_08735 (rimO)
Ribosome biogenesis [BR:
chrt03009
]
Prokaryotic type
ribosomal protein modification factors
MKS83_08735 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
UMQ43776
LinkDB
All DBs
Position
complement(1974809..1976110)
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AA seq
433 aa
AA seq
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MRTKSVGKKKINVVTLGCSKNVYDSEVLMSQLKANGKEVVHEDRGDIVVINTCGFIDNAK
EESINTILDYVDAKNRGEVEKVFVTGCLSERYKPDLIKEIPDVDQYFGTRDLPVLLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVNEAAKLA
KKGTKELILIAQDLTYYGLDIYKKRALGDLLKELVKVEGIEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLAKFREKVPDMAIRTTLIVGYP
GETEERFQELKDWVKEQKFDRLGCFTYSHEENTTAYVLEDDIPQEVKEARVEEIMELQSQ
ISWEKNQEKIGKTFKCVFDRKEGNYFIGRTEYDSPDVDNTVLVSAEDTYISIGEFANVRI
TSAEEFDLYGELV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacaaaatctgtaggtaagaagaaaattaatgtagtcacactgggatgctctaaa
aacgtgtacgattctgaagttttaatgagccaactgaaagccaatggtaaagaagtagtt
catgaagacagaggagatatcgtggtgatcaatacctgtggatttattgataatgccaag
gaagaatctatcaatactattttagactatgtggatgcaaagaacagaggagaggttgaa
aaggtttttgttaccggatgtctttctgaaagatataaaccggatttaattaaggaaatt
cccgatgtagatcaatattttggaaccagagatcttccggttcttttgaaacatttaggg
gcagattataagcatgagttagtcggagagagattaacaactactcccaaacattatgct
taccttaaaatatccgaaggttgcgacagaccttgttcgttttgtgctatcccgttaatg
agaggaggtcatgtttccactccgatcgaaaaattggtgaatgaagcggctaaacttgcc
aaaaaaggaacaaaagaattaatccttattgctcaggatcttacttactacggattagat
atctataaaaaaagagcattgggtgaccttctgaaagaattggtaaaggttgaaggaatc
gaatggatcagattacattatgcgttcccaagtggatttccggaggatgtattagatatt
atcagagaagagcctaaagtttgcaactatattgatattcctttgcagcacattaattcc
gatcttcttaaatccatgaaaagaggcacgactcatgaaaaaacggatgccttattggct
aagttcagagagaaagttccggatatggcaatcagaactacgcttattgtagggtatcct
ggagaaactgaagaaagatttcaggagctaaaagactgggtaaaagaacaaaagtttgat
agattaggatgctttacttattcacatgaagaaaatactacagcttatgttttggaagat
gatattccacaggaggtaaaagaagccagagtagaggagattatggaacttcaatcacag
atttcttgggaaaagaatcaggagaaaatcggaaagaccttcaaatgtgtttttgacaga
aaagaaggaaactattttatcggaagaacagaatatgattctccggatgtagataatact
gttttggtgtccgctgaagatacttatatctctatcggggaatttgccaatgtaagaatt
acctcagccgaagagtttgatctgtacggagaactggtatag
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