Chryseobacterium sp. Y16C: MKS83_09600
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Entry
MKS83_09600 CDS
T11021
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKS83_09600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrt03019
]
MKS83_09600
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_09600
Enzymes [BR:
chrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MKS83_09600
Messenger RNA biogenesis [BR:
chrt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MKS83_09600
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MKS83_09600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Cullin_Nedd8
HTH_24
DUF7022
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
UMQ43943
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All DBs
Position
2160238..2162139
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AA seq
633 aa
AA seq
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MISPQDLQKLKFDTLKYFWSYDTFRDSQEEIIDSILHSKDTLALLPTGAGKSLCYQLPAL
LREGVCLVISPLLALMKDQVNQLKSRQIEAEYLSSELDEFDAEVIYNRCKDGLTKLLYVS
PERLTNTQFLQNIEEIQLSFIAVDEAHCISEWGQDFRPSYQNIKEFRKNNPEIACLALTA
TATPKVLDEIKSKLELKNPAVFQKSFKRENIKIFSEEVSDKYQRVFDILKYATKSGIVYV
RTRKDAEQLTEFLHKNQLKNIDFFHAGLTTKEKNTRQNIWNNSDQHVLISTNAFGMGIDK
DNVRFVIHFSPSPSIENYYQEIGRTGRDGKKSFAFLLWDKQELSNFDQILKNQIPNKAEF
LRIITYLYSVFQVAEYELPEKVFQLNTAGIQNFTKLSKAKINNVLGFLHNQEIIYYNNNK
SLSSLQLLMKADEIDQLPQKDAYFIELLLRTVSGITTHKVMFSEQQVSNKIDVSVPLIKE
RLKELQQKNYIEYVDGALASIKFLKPRDERLINSSYWKLFEHIQKNKIQKWEEMKFYLED
NQYCKMKLILSYFGEKDTKNCGNCSVCEKKKRSVFGQNISLEIINILAKKPATIEELSIQ
LTYHPKDNILENLIYLLDSGKVKMLNFRTYMLA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgatttctccacaagacctacaaaaattaaaatttgatactctgaaatatttttggagc
tatgacactttcagggattctcaggaagaaattatagattccatacttcattcaaaagat
acattggccttgctacctacaggagctggaaaatcactgtgttatcagttacctgcactt
cttcgtgaaggtgtatgtctggttatttcaccgttactcgcgctcatgaaggatcaggtc
aatcaattgaaaagccgtcagattgaagcagaatacctatcttccgaactggatgaattt
gatgcggaagttatttataacagatgtaaagacggtctcacaaaattattatatgtctct
cccgagagattgacaaatactcagtttttacagaatatcgaagaaatacagctgtccttc
attgcagttgatgaagcacactgtatttcggagtgggggcaggatttcagacccagctat
cagaatattaaagaatttagaaaaaataatcctgaaattgcctgcttagctttaacggcg
actgcaacaccaaaagtgctggatgaaatcaaatctaagttggaattaaagaatcctgct
gtatttcaaaaaagctttaagagagagaatatcaagatcttttcagaagaagtttcagat
aaataccaaagggtttttgacatcttgaaatatgctacgaaatctggtattgtgtatgta
agaacaaggaaagatgcggaacagttgactgaattccttcataaaaaccaattgaaaaat
attgatttttttcatgcagggcttacaacaaaagaaaaaaacaccagacaaaacatttgg
aataacagcgaccagcatgttctaatatccaccaacgccttcggaatgggaatcgacaaa
gataatgttcgcttcgtcattcacttctctccttccccttctattgaaaattattatcag
gaaataggaagaaccggaagagatggtaaaaaaagctttgcattcttgctttgggacaaa
caggaactttcaaattttgatcagatcttaaaaaaccagatcccgaataaagcagagttc
ttaagaatcattacttatctctactctgtttttcaggtggcagaatatgaacttcctgag
aaagtttttcaattgaatacggctggaattcagaatttcacaaagctgtcgaaagcaaaa
atcaataatgtactgggctttctgcataaccaggaaattatttattataataacaataaa
agcctttcatctttgcagttattgatgaaagcagatgaaattgatcagctccctcaaaaa
gacgcttattttattgaacttttattaagaacagtatccggaattaccactcataaagta
atgttcagcgaacagcaggtcagcaataaaatcgacgtaagcgttccattaatcaaagaa
agattaaaagaattacagcaaaaaaactatatagaatatgttgacggagctctagcaagc
attaagtttttaaaaccacgagacgaaagacttattaacagctcatactggaaattgttt
gaacatattcagaaaaacaagatccagaaatgggaagaaatgaaattttatcttgaagat
aaccaatactgcaaaatgaagcttattctttcttattttggagaaaaggatactaaaaat
tgcggtaactgttctgtctgtgaaaaaaagaaacggtcagttttcggacagaatatttct
ctggaaatcattaacattttagctaaaaaaccggcaacgatagaagaactttcgatacag
cttacttatcatccgaaagataacattctggaaaacctcatttatcttttagattcagga
aaagtaaagatgctgaatttcagaacatatatgttagcttaa
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