Chryseobacterium sp. Y16C: MKS83_14290
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Entry
MKS83_14290 CDS
T11021
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K14162
error-prone DNA polymerase [EC:
2.7.7.7
]
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt03030
DNA replication
chrt03430
Mismatch repair
chrt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKS83_14290 (dnaE)
03430 Mismatch repair
MKS83_14290 (dnaE)
03440 Homologous recombination
MKS83_14290 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_14290 (dnaE)
Enzymes [BR:
chrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKS83_14290 (dnaE)
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Other SOS response factors
MKS83_14290 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UMQ40564
LinkDB
All DBs
Position
complement(3178568..3181621)
Genome browser
AA seq
1017 aa
AA seq
DB search
MFINCHSFHSLRYGTISVKELVQQCVDLGIGVAALTDINCISGIYDFHRLCEKSNIRPVV
GVDIRTDNKQHYICLAKNQSGIGQINRLLTLHNCEGKDLPLHRPNLPDVFVVYPLSNYPE
KLQRNEYIGIRPEEINLLINSSLRKYLPRMVILQPVTFTTKKEYTLHKILRAIDRNTLVT
KLDENDICRQNEKLISKDELLEKYQHYPQIIENTQRLLEQCHFHFDYKTPKNKKNFTESK
DSDIKLLKELAYKGFTNRYPNDDGKAKARMDKELGVIDQLNFCAYFLITWDIIQYSNRMG
FMHVGRGSGANSIVAYCLGITDICPLELDLYFERFLNLNRKTPPDFDIDWSWQNRDTILQ
YIFDKYGKDHVAFCGTNVEFKYKSIFREVGKAFGLPKEELDELASKSIEQHDINSVSAMV
HKYGKLLEKFPNQRSMHSCGILISEEPITNYSALEMPPKGFPIVQFDMHVAEEIGLEKFD
ILSQRGLGTINDTVKLIEEKRGIKVNIRDVSLSKDEQKCNEFLSRGKTIGCFYIESPAMR
GLLRRLKCNNYKVLVAASSIIRPGVAQSGMMKEYIFRHNNPDQFEYFHPVFEKELGETYG
IMVYQEDVIKIALHFGGLSPADGDVLRRAMSGKGRSLSALQKVKDHFFESCKSLGHPEQL
SKEVYRQIESFAGYSFCKAHSASYAVESYQSLYLKVYYPIEFMVSAINNGGGFYRTEVYV
HEARMSGATILNPCVNLSEYQTTVYEKDVYLGLMHIEKLESKIAVSIPEERKNNGDYTSL
ENFVKRIPIGIETLQTLILIGAFRFTGKQKHELLIEARFLLAGNRPSFKHLTLLEEPQKE
YTLPKVQRHPLEDAFDEIEILGFPVLVRPFDLLQTKYRGSVMVKDLTKYHKKQVKMLAYL
ISRKHVPTKRGTMYFGTWIDAEGEYFDTAHFPDNLTQYPFQGGGCYLLLGTVEVDFHFPT
ITILKMAKMPFIPDPRYTLDKDKAYEAYNNIREDVSMTFRKPYPQEHEIGLPRRKMS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcaattgtcattctttccatagcttacgttacggtaccatttccgttaaagaa
ttggttcaacagtgcgttgatctgggaatcggtgtggccgctttgaccgacatcaattgt
atctccggcatttatgactttcacagattatgtgaaaaaagcaacatcaggccggtcgtg
ggtgtggatataagaactgacaataaacagcattacatctgcctggcaaaaaatcaatca
ggcataggacaaatcaacaggcttttgacgctacataattgtgaaggaaaagatctgcca
ttacatcgccccaatctgccggatgtatttgtcgtatatcctctgagcaattaccctgag
aaacttcagcgaaatgaatacatcggcatccgtcctgaagaaatcaatcttttgattaat
tccagcctcagaaagtatctgccaagaatggtcattttacagccagtgacttttacaacc
aagaaagaatacacactacataagattctgcgtgccatcgaccggaatacgttggtcact
aaacttgatgaaaatgatatatgtaggcaaaacgagaagctgatttcgaaggatgagctt
ctagaaaaataccagcattatccgcaaattattgaaaatacccaacgattacttgaacaa
tgccattttcattttgattataagacccctaaaaacaaaaaaaactttacagaaagtaaa
gacagcgatataaagctcttgaaggaacttgcctataaagggtttaccaacagatatcct
aatgatgacggaaaggctaaagcacggatggataaggaattgggtgtcattgaccagctg
aatttctgtgcttatttccttatcacttgggacatcatccagtacagcaatcggatggga
tttatgcacgtcggtcgcggaagtggtgccaatagtatcgttgcctactgtcttggcatt
acggacatctgcccgctggagcttgatctgtactttgaacgctttctgaatctgaaccga
aaaacaccgccggatttcgatatcgactggagctggcagaacagggataccattttacaa
tacatctttgacaaatacggaaaagaccacgtggcattttgcggcacgaacgtcgaattt
aagtataaatcgattttccgtgaggtaggaaaagcatttggtctgccaaaagaggaactg
gatgaactggcctccaaatccattgaacagcacgatattaattcggtgtcagcaatggtt
cacaaatatggaaaacttttagagaaatttccaaaccagcgaagtatgcattcttgtgga
attttaatctctgaagaacccatcaccaattactcggcattggaaatgccgccgaaggga
tttccgattgtccagttcgatatgcacgtggccgaggaaatcggtctggaaaaattcgac
atcctttcccaacggggcttgggaaccatcaacgatacagtgaagctcatcgaagaaaaa
cggggtatcaaagtcaatattagagatgtgagcttgtcaaaggatgaacagaaatgcaat
gaatttctgagcaggggaaaaacaattggatgcttctatattgaaagtccggccatgcgc
ggacttctccgaagattaaaatgcaacaattacaaagtattggtggcggcatcgtctatt
atccgtccgggcgtagcacaaagcggaatgatgaaggaatatatcttccgtcacaacaat
cctgatcaatttgaatattttcatccggtttttgaaaaagaattgggggagacttatggc
attatggtgtaccaggaggatgttatcaaaatcgcccttcatttcggaggcctgtcacct
gctgacggcgatgtgttacgccgggcaatgagcggaaaaggacgttcgctctctgcactg
cagaaagtcaaagaccatttctttgaatcctgtaaatccctgggccatccggagcagctc
tccaaagaggtttaccgccagatagaatcctttgcaggctattcattttgcaaggcccac
tcggcatcttacgcggtagaaagctaccaaagcctttatctaaaggtttattatcctatc
gagtttatggtttcggcgataaacaatggcggcggtttctacagaacagaggtatatgtc
cacgaagcgagaatgtcaggtgcaaccattttaaatccctgtgtcaatctaagcgaatac
cagactactgtttacgaaaaagatgtttatttagggctgatgcatattgaaaagctggaa
agtaaaatcgcagtttcaattcctgaagaacgaaagaacaacggtgattatacctccctg
gaaaactttgtcaaaagaatccctattggtattgagactttacagaccttgatattaata
ggagcattccggtttaccgggaagcaaaagcacgaactgttaattgaagcccgttttctt
ttagcaggaaacaggccgtcttttaagcatttaacattactggaagaaccgcaaaaagaa
tatacccttccaaaggtgcaaagacatcctttggaggatgcatttgatgaaattgagatc
ttgggatttccggttttagtgaggccattcgacttattacagaccaaatataggggaagt
gtaatggtaaaagacctgacgaaataccataagaagcaagtcaaaatgcttgcctacttg
atttccagaaagcacgttcccaccaaaagagggacgatgtatttcggaacgtggatagac
gcggagggtgaatattttgatacagcgcatttccctgacaatctaactcaatatcctttt
cagggtggtggatgctatttattattaggaactgtggaagtagactttcactttcccacc
ataaccattttaaaaatggcaaaaatgcctttcatccccgacccaagatacactttggat
aaagacaaagcgtatgaagcttataataatatccgggaagatgtgagtatgactttcaga
aagccttacccgcaggaacacgagattggattgcctaggaggaaaatgagttga
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