Chryseobacterium sp. Y16C: MKS83_16745
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Entry
MKS83_16745 CDS
T11021
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrt Chryseobacterium sp. Y16C
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrt03032
]
MKS83_16745 (topA)
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_16745 (topA)
Enzymes [BR:
chrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MKS83_16745 (topA)
DNA replication proteins [BR:
chrt03032
]
Prokaryotic type
DNA Topoisomerases
MKS83_16745 (topA)
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MKS83_16745 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
UMQ41041
LinkDB
All DBs
Position
3699829..3702390
Genome browser
AA seq
853 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLATFSPDYEVSADKK
KLVTELKAAVKKAEMVWLASDEDREGEAIAWHLAEELKLKPENRKRIVFHEITKNAILKS
IENPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IREFVPKASFKLDGIFLNKAAQEISAKLKKDFDKEEDAENFLEQARTAEFKVLNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGYITYMRTDSVNLSQEAIEGAK
KQIISEYGAAYSSPRNYTTKSASAQEAHEAIRPTDFAVTSIGDAQLNRLYQLIYRRTLAS
QMANAKIEKTIIEIGNAKLPQYFEAQGEVIIFDGFLKAYGIVKTEDDDEENNEKLLPKVS
VGEILEYKKITATEKFTRPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPQTREVVKISLAKDKIKKEVLEEKFGGDKNKFVPTDTGEVVSDFLTDNFKEILDYGFT
ARVEESFDEIANGDQKWKEMMTDFYSKFHPRIEDVEEHAERATGDRLLGVDPKTGKNVHA
RIGRFGAMIQIGETDDEEKPIFASLMAGQNIATITFEEALELFKLPFDLNEVDGQPVSVG
VGRFGPYVKWGETFISIPKGEDPLSVDQKRAEEIINEKKVADAPIATYKGEPVTKGTGRF
GPFIKYQSIFVNVPKRYDFENLSQSDINELIDAKLEKEANRYIQQWEKEKISIENGRWGP
FIKFGKAMFKIPKKADDTKYESEELKDVSLDEVKKWIIDQDPKAFAEKKKPAAKKAATTK
KATTAKKTVAKKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtcgaatcaccggcaaaagcaaaaactattcagaagtat
ttaggtaaggattttgaagtgaaatccagtttcggacatatccgggatttgcctaaaaaa
ggaatggggattgacttggctaccttcagtcccgattacgaagtttctgctgacaagaaa
aaattggtaacagaattgaaagccgcggtgaaaaaagccgaaatggtttggctggcttcc
gatgaagaccgcgaaggagaggctattgcatggcacttggcggaagaattgaaactgaag
ccggaaaacagaaaaagaatcgtcttccatgagattactaaaaatgccattctaaaatca
attgaaaatccaagagatatagaccagaacctagtcaatgctcaacaggcgagaagggtt
ttggatagaatcgtaggtttcgaaatgtctccggttctttggaaaaaagtaaaaccggga
ttatctgcaggaagagtacaatcggttgcggtaagattaattgttgaaagagaaaaagaa
atccgtgaatttgtacccaaagcaagctttaaactggacggaattttcttaaataaagct
gcacaggaaatttcagcaaagcttaaaaaggattttgataaagaagaagatgcggaaaat
ttcctggaacaggcaagaactgctgaatttaaagttttaaacgttgaaaccaagccggga
acacgttctgcttctgcgccatttacgacttctaccttgcagcaggaagcttcttcaaga
ttaggatataatgtgaccaacaccatgcgtcttgcacaaagactgtatgaagaaggatac
attacttatatgagaacggattcggtaaacctttctcaggaagctatagaaggtgcaaaa
aaacaaatcatctcagaatacggagcagcatattcttcaccaagaaattataccactaaa
tctgcatcggctcaggaagctcacgaagcaattcgtccgacagattttgccgtgacaagt
atcggagatgctcaattaaacagattataccagttaatttacagaagaaccttggcttct
cagatggccaatgctaaaattgagaaaacaataattgaaatcggaaatgcaaaacttccc
cagtattttgaagcacagggcgaagtaatcatttttgatggtttcttaaaagcttacgga
atcgtaaaaactgaagatgatgacgaagaaaacaacgaaaaattgcttccgaaagtaagc
gttggagaaattttagagtataaaaaaattacggcaacagaaaaattcacaagaccaagc
gcaaggtatacggaagccggtttggtaagaaagcttgaagaattgggaataggtcgtccg
tctacatatgcgccgaccattcagaccattcaaaaccgtgaatatgttgataaaagagaa
attgaaccgcaaacgagagaagtggtaaaaatttctttggcaaaagataaaattaaaaaa
gaagtccttgaagagaaatttggaggggataaaaataagttcgttccgacggacaccgga
gaagtagtaagtgatttcttaacagataactttaaagaaatcttagattacggattcacg
gcaagagtagaagaaagtttcgatgaaattgccaacggtgaccagaaatggaaagaaatg
atgacggatttctactcaaaattccatcctagaattgaagatgtagaagaacatgcagaa
agagcaacaggagatcgacttttgggtgttgatcctaaaaccggtaaaaatgtccacgca
agaatcggaagatttggagcgatgattcagatcggagaaacggatgatgaagagaaacca
attttcgcatcattaatggctggacagaatattgcaaccatcacttttgaagaggctctg
gaactattcaaacttccattcgatttaaatgaagttgacggacagcctgtttcggtgggg
gtcggaagattcggcccttatgtgaagtggggtgaaactttcatcagtattccaaaaggt
gaagatccgctttcagtagatcagaaacgtgcagaagaaatcatcaatgaaaagaaagtt
gcggatgctccaattgctacctacaaaggtgaacctgtaacaaaagggacgggaagattc
ggacctttcatcaaatatcaaagtatcttcgtaaacgttccgaagagatatgattttgaa
aatctttctcaaagcgatatcaacgaattgattgatgctaaactggaaaaagaagccaac
agatatatccaacagtgggaaaaagaaaaaatttccattgaaaacggaagatgggggcct
ttcatcaagttcggaaaggcaatgttcaaaattccgaaaaaagcagatgataccaaatat
gagagcgaagaattgaaagacgtttctcttgatgaggttaaaaaatggattatcgatcag
gatccgaaagcttttgctgaaaagaaaaagcctgctgcgaagaaagctgctacgactaaa
aaggcgacgacagcaaagaaaacagttgccaaaaagaaataa
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