Chryseobacterium sp. Y16C: MKS83_16950
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Entry
MKS83_16950 CDS
T11021
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
chrt Chryseobacterium sp. Y16C
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_16950
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MKS83_16950
Archaeal homologous recombinant proteins
MKS83_16950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Seryl_tRNA_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UMQ41077
LinkDB
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Position
complement(3747693..3750731)
Genome browser
AA seq
1012 aa
AA seq
DB search
MIPIQLTLEGLYSYQERQKIDFQNLTEAGLFGIFGSVGSGKSSILEAISFALYGETERLN
ARDKRTYNMMNLKSNRSYIEFDFINYENKKYRATREFRRNSKNFEDVKTPNVVFYEWKNE
SWIPLEHSNSEKLIGLSYANFKRTIIIPQGQFKEFIELGATERTNMMKEIFSLQRFDLQH
NVSALNLRNRSELDQLEGQLKGFEEVNEEQISAQKEYLKAEQLKFNELQKVFKETEEKYS
KLKSLKDEVELLQQKKADFEKLTEKKTEIDALDKKTEIYDRVSRIFTPLLSEKNKLEKEI
TDRQKNKEGQSKILQETEIQFENIKNRLSVIQPKYEALNESKIQENDLVLMLQMLKISGE
IETLKDRTEKGSEKVKEVEANQKLIQQKIEELSKNAELLKQKKLDSALLLSVGNWFLEKK
KLNEVFQNQIEKIGLKKAEIEKISEELKSFEINPENFRNDFKAQTEILEKEKKLLSDKKS
HLEVQQKLAHFANELHDGESCPLCGALEHPNIVEFDDVNSELNEIQKQIEQIEIQKENIQ
KWFLDIEKIIDRKKIFEEQLNSKKESLQQIQNTIEEHHKSFNWKEFNAENPNDFEEKRQQ
SFSIEKKMDELHLQISLEQKNLDKERENLDSYNKALEKFRLDEAKKEEQIKTNEGNLKVL
TWIDYRKKTIAEVGEILSQRSQSNHETEQNYQQLIKEEKEITPKLAEQKTVVSQLEKRIS
ELEKNIAGNQDLIEKALSEQFFNSSDEIQQILAQEINVQETRNTIQHFRIQFETLKNSIL
ELEAKLKGFSFNEEEFSALENQFKASENDVKTVNNSVIKITAEIDRLEKEFKKKEGLLRD
LAQLQKRSENLKIMTNLFKGAGFVQYVSSIYLRQLCDHANIRFHRMTRNQLSLQLNENND
FEIIDYLNEGKCRSVKTLSGGQAFQVSLSLALALAESVQSNAQSESNFFFIDEGFGTQDL
ESVNVVFETLMNLQKENRVVGIISHVEELKEKIPVSLNIRKDEERGSLIELM
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgattcctattcaacttactttagagggtctttattcttatcaggagcgtcagaaaatc
gattttcaaaatcttactgaggccgggctttttggaatctttggttcggtcggctccgga
aaatcttctattctggaagccatttcttttgcactttatggagaaaccgagagactgaac
gcaagagataagcgtacttacaatatgatgaatctgaaatcaaatagatcttatatcgag
tttgattttattaattatgaaaataaaaaataccgtgccacaagagagttcagacgtaat
tctaaaaactttgaagatgtaaaaactccgaatgtcgtattctacgaatggaaaaacgaa
agttggattccgctggagcattccaattcagaaaagcttatcggattgagctatgccaac
tttaaaaggacgatcattattcctcagggacagttcaaagaattcatagaacttggcgca
accgaacgtaccaatatgatgaaggaaatcttcagtcttcagcgttttgatcttcagcat
aatgtttccgctttaaacctaagaaacagatcagaactggaccagctggaaggacagctg
aaaggctttgaggaagtgaatgaagaacagatttcagcacagaaagaatatttaaaagcc
gaacagctgaagtttaatgagctacagaaagttttcaaagaaaccgaagaaaaatattca
aagctaaaaagcctgaaagacgaggttgaacttctacaacagaaaaaagccgattttgaa
aagctgaccgaaaagaaaaccgaaattgacgctctagacaagaaaactgaaatctacgac
agagtttcaaggatttttacgcctttactttctgagaaaaacaaacttgaaaaagaaatt
acggatcgacagaaaaataaagagggtcagtctaaaattttacaggaaactgaaattcag
tttgaaaatatcaagaataggctttccgtgattcagcctaaatatgaagctttaaatgaa
tcaaaaattcaggagaatgatttggtcctgatgcttcaaatgctaaaaatttccggagaa
atcgaaactttaaaagaccgaaccgaaaaaggatcggaaaaagtaaaggaagttgaagct
aaccagaagctaattcaacaaaaaattgaagagctttcaaaaaatgcagaacttttaaaa
cagaaaaagctggattctgctttattattaagtgttggaaactggtttttggaaaagaaa
aagctgaatgaagtttttcaaaatcaaattgaaaaaattggtttaaaaaaagctgaaatt
gaaaaaatatcagaagagttgaagtcttttgaaatcaatcctgaaaatttcagaaatgat
tttaaagctcagactgaaatcttagaaaaagagaaaaaattactttcagacaagaaaagc
catcttgaagtacagcaaaaacttgcacattttgccaatgaactgcatgatggagaatca
tgtccgctttgtggagctctggaacatccgaatattgttgagtttgatgatgtcaattcg
gaattaaacgaaatccagaaacagattgagcagattgaaattcagaaagagaacattcaa
aagtggtttttagatattgaaaaaattattgaccgtaaaaaaatctttgaagaacaactg
aactcgaaaaaagaaagcttacaacagattcaaaatacaattgaagaacatcataaaagc
tttaactggaaagaatttaatgctgaaaatccgaatgattttgaagagaaacgccaacag
tctttttccattgaaaaaaagatggatgagctgcatcttcaaatcagtcttgaacaaaaa
aatcttgataaggaaagagaaaacctggatagttataataaagccttagaaaaattcaga
ctagatgaagctaagaaagaagaacagatcaaaacaaatgaaggaaatttaaaagttttg
acctggattgattacaggaaaaaaacaattgcagaggtcggggaaattctctctcaacgc
tctcaatccaaccatgaaactgagcagaattatcagcaactcattaaagaggaaaaagag
attacaccaaaacttgctgaacagaaaacagtggtttctcagctggaaaaaagaatctct
gaattagaaaaaaatatcgcaggcaatcaagatttaattgagaaggctttgtcagaacaa
ttctttaatagttcggatgagattcaacaaattcttgcacaggaaatcaatgttcaggaa
actagaaatactatccagcatttcaggattcaatttgaaacgctgaaaaacagtattctt
gagcttgaagccaaactgaaaggtttttcttttaatgaagaagaattttcagccctagaa
aatcaattcaaggcttctgaaaatgatgtaaaaacggttaataattcagttataaagatc
actgccgaaattgatcgactggaaaaagagtttaagaaaaaagaaggtcttttaagagat
ttagctcaacttcaaaagcgttcggagaatctgaagattatgaccaatctctttaaagga
gctggctttgtacagtacgtttcctccatttacctgcgacaattgtgtgatcatgccaat
atacgttttcaccggatgacaagaaatcagctaagtctgcaattgaatgaaaacaatgat
tttgaaattatcgattacctgaatgaaggcaaatgccgaagcgtaaagacgctttccgga
ggacaggcgttccaggtttctctgagccttgctttagcattggcagaaagtgttcaaagt
aatgcacaatcagagtcaaacttctttttcattgacgaaggcttcgggacccaggactta
gaatccgtaaatgtagtatttgaaaccctgatgaatcttcagaaagaaaacagagttgta
ggaattatttcgcatgtggaagagctgaaagagaaaattcccgtttcactcaatattcga
aaagatgaagaacgcggaagtttgattgagttgatgtaa
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