Chryseobacterium sp. Y16C: MKS83_16955
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Entry
MKS83_16955 CDS
T11021
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
chrt Chryseobacterium sp. Y16C
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_16955 (sbcD)
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MKS83_16955 (sbcD)
Archaeal homologous recombinant proteins
MKS83_16955 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Metallophos_3
YqgU
DUF1574
Motif
Other DBs
NCBI-ProteinID:
UMQ41078
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All DBs
Position
complement(3750731..3751936)
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AA seq
401 aa
AA seq
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MKILHTADWHLGKRLDRFSRMEEQISVMNEIVEIADEQNVDLILIAGDLFDNFNPSTEAV
ELFYKTLKRLSHNGKRPVIAISGNHDSPSFIDAPDPLARECGIILIGYPKAKISPFALED
FKISKSAAGFLELELKEYPFPIRLLHTPYANEIRLKEYFGENKEAELNNILEKHWKETAD
EFCDESGINLLITHLYMNKKGAPLLDEPEGEKPLKIGNADLVFSDIIPDQIQYTALGHLH
GFKNIGTEEKPVVYSSSPLCYSFSEAGHTKYVSIIDAEPNQPVSYERIALKNGKPLVRKM
FQSVETAVEWLNENQKSLVELTLESETYLKAEERKLLYQSHNGIVYLIPKVKNLETDTNS
LSDINLNQDIQTLFRDYFKAKNGGQDANEDLINLFNEILNP
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctacataccgccgactggcatttggggaaacgtctcgaccgtttttcgaga
atggaagagcagatttcggtgatgaacgaaattgttgagattgccgatgaacaaaatgtg
gacttgattctgattgccggagatttgttcgataatttcaatccgtcgacagaagccgtc
gaacttttttataaaaccttaaaaagactttcacataacgggaaacgtcctgtaattgct
atttccggaaaccatgattctcccagttttatagatgctccggatcctttagcaagagaa
tgtggaattattttgatcggttatcccaaagcaaaaatttctccttttgccctggaagat
tttaaaatttcaaaatcagctgcaggatttttagaactggaactgaaagaatatcccttc
ccgatacgtttacttcataccccttatgctaacgaaatccgcctgaaggaatattttggt
gaaaataaagaagctgagctgaacaatatactggaaaagcactggaaagaaactgcggat
gaattctgcgatgagagcggaatcaacctgttgatcactcatttatatatgaacaaaaaa
ggagctccgcttcttgatgaacctgaaggggagaaacctcttaaaatcggcaatgcagat
cttgttttttcggatattattcctgatcagattcaatataccgctttgggacatctccat
ggttttaaaaatataggtacagaagaaaaacctgttgtgtattcatcttcgcctttgtgt
tacagtttcagtgaagctgggcacacgaaatatgtatcgattattgatgctgaacccaat
caaccagtttcttacgaaagaattgctttaaaaaacggaaaaccactggtccgaaaaatg
tttcaaagtgtggaaactgctgtagaatggctgaatgaaaatcaaaagtcactagtagag
cttactttagaaagcgaaacttatttaaaagctgaagaaagaaaactgctgtatcagtct
cataacggaattgtatatctgattcccaaagtgaaaaatctcgaaactgatacgaatagc
cttagtgacatcaatctcaatcaggatatccaaaccttgtttagggattattttaaagct
aaaaacggcggtcaggatgctaatgaagacctcattaatttgtttaacgaaattcttaat
ccataa
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