Chryseobacterium sp. Y16C: MKS83_19520
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Entry
MKS83_19520 CDS
T11021
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K14162
error-prone DNA polymerase [EC:
2.7.7.7
]
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt03030
DNA replication
chrt03430
Mismatch repair
chrt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKS83_19520 (dnaE)
03430 Mismatch repair
MKS83_19520 (dnaE)
03440 Homologous recombination
MKS83_19520 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_19520 (dnaE)
Enzymes [BR:
chrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKS83_19520 (dnaE)
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Other SOS response factors
MKS83_19520 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UMQ41562
LinkDB
All DBs
Position
complement(4296588..4299665)
Genome browser
AA seq
1025 aa
AA seq
DB search
MFLNCHTYHSLRYGTISVEDLVQQAVDYKLKVLALTDINTITGIYQFYKLCQERNIKPIV
GVDIRVENEQYFICLSKNPKGIAEINRLLTDYICEGVKIPKANPQLENCFVIYPLGNIPE
KLLEHEFIGIRQEELNLLINRKFKSLIHKMVILHPVTIKKNEEYELHRILRAIDSNILLS
QVNPHDCCRKNESFVAKKQLLEKFNHYPQILDNTKYLVDNCSFDFDFKTPKNKKYFTDSK
ENDFKLLSKLAYEGLVKRYGQDNKDAKARLEKELAVIDQLNFCGYFLITWDIVQYSMMRG
FMHVGRGSGANSIVSYCIGITEICPLELDLYFERFLNLNRKTPPDFDIDWSWVNRDAILA
YIFNKYGKDHVAFCGTNVMFKRKSRFREIGKVFGLPKEELDQLSKNSNEQHDQNSVVQEI
YKYEQLLIGFPNQRSMHSCGILISEEPITNYSALESPPKGFPIVQFDMHTAEDIGLEKFD
ILSQRGLGTIKDTVQFLEEKKGIFVDIEDTRISKNEAKCNEYLSLGNTIGCFYIESPAMR
GLLRRLKCDNYKVLVAASSIIRPGVAQSGMMKEYVFRHNHPGQFEYFHEVFEKELGETYG
IMVYQEDVIKIALHYGGVSAANGDVLRRAMSGKGRSLSALQKLKDDFFESCKKKGHPEQL
SEEVYRQIESFAGYSFCKAHSASYAVESYQSLYLKAYYPIEFMVSAINNGGGFYRTEVYI
HEARMSGAQINNPCINLSLYQTTVYGKNIYLGLMHIVKAEKNLMQFIIEERQENGDYQSL
EDFVKRVDIGTETLKLLILVGAFRFTRKSKTELIVESKYLLSKTTVMKSFMPSLFETPQK
NYELPIIERHPLEDAFDEIEIMGLPVSNSIFDLLKTKYRGHVLVKDLPKFHKKQVKMLAY
LISRKHVPIKRKDHPLGKDFMYFGTWIDCEGKYFDTAHFPKSLEKFPFREGGVYLLLGTV
EIDYHFPTVTITKMSRMPLRDDPRYAMDKDKSKEVENSLRDDVSLTFREPYPKEHEIGLP
RKKYR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcaattgccatacttatcatagcttacgttatggaaccatttctgtcgaagat
ttggttcagcaggctgtggattataagctgaaagttttggcattgactgatattaacaca
ataacgggaatctatcagttttataaattgtgtcaggaaagaaacattaagccaattgtt
ggggttgatatcagggttgagaatgaacaatactttatatgtttatctaagaatccaaaa
ggcattgctgagattaatcgactgttgaccgattatatttgtgagggtgttaaaattcca
aaagcaaatcctcaactggaaaattgtttcgtaatctatcccttaggaaatatcccagag
aaattattagagcatgaatttataggaataagacaagaagaattaaatctccttatcaat
cgcaaatttaagtctctgattcataaaatggtcattcttcatccagttacgataaaaaaa
aatgaggaatatgaacttcatagaatcttacgggctattgattccaacattttactaagt
caagtcaatccacatgactgctgcaggaaaaatgaaagtttcgttgccaaaaaacagctt
ttagaaaaatttaaccattatcctcaaatcttggataatacaaaatacttagtagataac
tgcagttttgatttcgattttaaaacacctaagaacaaaaaatattttacagacagcaag
gaaaatgattttaaattattatcaaaattagcttatgaaggattagtaaaaagatatggt
caggacaacaaagacgcaaaagcaagactggaaaaagaattggcagttattgatcagctg
aacttttgtggctattttttaattacatgggacattgttcaatatagcatgatgaggggt
tttatgcatgttggcagaggaagcggtgcaaattcaattgtcagctattgcattggaatt
actgaaatctgccctttagaattagacctatattttgaacgcttcttaaaccttaaccgt
aaaacgcctcctgatttcgacatcgattggagttgggtcaatcgggatgcaattttagct
tatatctttaataaatatgggaaggatcatgtagctttttgcggtaccaatgtcatgttt
aaaagaaaatccagatttagggaaatcgggaaagttttcggtcttcctaaagaggaattg
gatcaactttcaaaaaactcaaacgaacagcacgatcaaaattcagttgttcaggaaatc
tataaatatgaacagttattaataggttttcctaaccaacgtagtatgcattcctgcgga
attctgatttctgaagagccaataactaattattcggctttagaatctcctccaaaaggt
ttccctatcgttcagttcgatatgcatactgctgaagatataggattggaaaagttcgat
attctttcacagagaggtcttggtaccatcaaagatactgttcagtttctggaagaaaaa
aaagggatttttgtagatattgaagacactagaatttctaaaaatgaagccaagtgtaat
gaatatttaagtttaggaaatacaatcggatgtttttatattgaatctcccgctatgcgg
ggattattaagaaggctaaaatgcgacaactataaagtattggttgctgcatcttctatt
attcgcccaggtgtagcgcaaagcggtatgatgaaggaatatgttttcaggcataatcat
ccagggcaatttgaatacttccatgaagtttttgaaaaagaacttggggaaacttatggc
attatggtctatcaggaagatgttataaaaattgctctccattatggaggagtttccgct
gccaacggtgatgttttaagaagagctatgagtggcaaaggaaggtctctttcagccctc
cagaaattaaaagatgatttctttgagtcctgtaagaaaaaaggacatcctgaacagctt
tcagaagaagtctaccgacagatcgaatcttttgctggatactctttctgtaaagcacat
tcagcatcttatgcagtagaaagctatcaaagcttatatctaaaagcctactaccctatc
gaatttatggtatccgcaatcaataatggtggtgggttctaccggaccgaagtttacatt
cacgaagccagaatgtcaggagctcaaatcaataacccatgcatcaacctgagtttatat
cagacaacagtatatggaaaaaatatctatctgggtttaatgcatatcgtaaaagctgaa
aaaaatttaatgcaattcattatagaagaaagacaggagaatggagactatcaatcattg
gaggattttgtcaaaagagtggatattggtactgaaaccttgaagttattgattttggtg
ggagcattcagatttacgcgaaaaagtaaaacggagctgattgtagaatcaaagtattta
ttatcaaaaactaccgttatgaagtcctttatgccatcattatttgagacacctcaaaaa
aactatgagttgccaattatagaaagacatcctcttgaagatgctttcgatgagattgaa
attatgggacttcctgtatctaactcaatatttgatttattaaaaacaaaatacagaggt
catgtattggtgaaggatttacccaaatttcataaaaagcaagttaaaatgctggcttat
ctcatctcaagaaaacatgttccgatcaagagaaaagatcatcctttgggaaaagacttt
atgtatttcggaacctggattgattgtgaaggtaaatatttcgatacagctcattttcct
aaaagcctagaaaaattcccttttagagaaggtggtgtttatcttcttctgggaactgtt
gagattgattatcactttcccacagtaaccattaccaagatgtcaaggatgccacttagg
gatgatcctagatatgccatggataaagataaatctaaagaagttgaaaacagtcttcgt
gacgatgtaagtttaactttccgagagccctatcccaaagaacatgaaattgggctaccc
agaaaaaaatacagataa
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