Chryseobacterium sp. Y16C: MKS83_19560
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Entry
MKS83_19560 CDS
T11021
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt03420
Nucleotide excision repair
chrt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MKS83_19560
03430 Mismatch repair
MKS83_19560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_19560
Enzymes [BR:
chrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MKS83_19560
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MKS83_19560
MMR (mismatch excision repair)
Other MMR factors
MKS83_19560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UMQ41570
LinkDB
All DBs
Position
complement(4305489..4307174)
Genome browser
AA seq
561 aa
AA seq
DB search
MPVEISSDSLIEINKHFKVKAGPGAGKTHWLVEHIKNVTRNSTLISGAKKILCITYTNIA
AETVLTRLGSSATQVEVLTIHSFFYSHIIKPYLSFIAEEYDFDVSSLDGHTDIIVSDYSF
LQEWKALTGQKRITDDNLITYAFERLRWLLVDDELIVRTDYPVRFGGYPIKNSSYFDYKK
MTWQRGILHHDDVLFFAYQIIKKFPFVIKIINKKFPYVFIDEFQDSNPIQVNIIEKLSTG
SIIGIIGDVAQSIYAFQGASPALFDGFTLPEMEHYFLKFNRRSTNEIIDFLNIIRQDLPQ
DYHRTVSISKPVLYVGDMVEALRRAKTSCPDGYVYTLSRNNITSNAMKSEINGSGMDDKL
LRKIKLEDSTKKRADIITACITAVALGQQSKFKESIKVLENVINYRRNRLEGKKKALHYL
TILMAKFNDYKDLSMLEFSEFIRLNINDSIPKATKGKGKIFYENNTFQSVYLCVNISEDL
SYHRTVHKAKGDEFDNVLLILKEEKDLKFMYEPDLYNYTQEEHRIYYVGASRAKDQLFIS
VPTLDANVEDIIKDMVNVERF
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaaatatcatccgattccttaatagagattaataaacattttaaagttaag
gctggacctggtgctggtaaaacgcactggctagttgagcacattaaaaatgttacaaga
aattccacactaatttccggcgcaaagaagattctttgcattacatataccaatattgca
gctgaaacagttttaacaaggcttggaagttcggcaactcaggttgaagtattgacaatt
cacagtttcttttattcccatataattaaaccttatctatcattcattgctgaagaatat
gattttgatgtcagctcgctagatggtcatacagatattatagtttctgattactcattt
ttgcaggagtggaaggcattaaccggtcaaaaaagaattaccgatgataatttaattact
tacgcctttgaaagactcagatggttactagtagacgatgaattgattgtcagaacagat
tatcctgtcagatttgggggttatcctattaaaaacagctcatattttgattacaaaaaa
atgacttggcagaggggtatacttcatcatgatgatgtattgttttttgcctatcagatt
atcaaaaagtttccttttgttattaaaataatcaataagaagttcccttacgtatttatt
gatgaatttcaggatagcaaccctatacaggtaaacataatcgaaaagttatcaactggt
tctataattggaatcatcggtgatgtagcgcaatccatatatgcatttcaaggtgcatca
cctgcacttttcgatgggtttacattacctgaaatggagcattattttttaaaatttaat
cgcagaagcactaatgaaatcattgatttcctaaatattatcaggcaagatcttcctcaa
gattatcatagaacggtttctatatcaaaaccagtactttacgtgggtgatatggtcgaa
gctctgagaagagccaaaacctcttgtcctgatgggtatgtgtatacattatctagaaat
aatatcacttccaatgctatgaaatcagaaataaacggctctggaatggacgataagctt
ttacggaaaatcaagttagaagactcgactaaaaaaagggctgatataataacagcgtgt
attactgctgttgctctcgggcagcaatctaaatttaaagaatccataaaagttttagaa
aacgtaataaattatagacgtaataggttagaaggaaaaaagaaagctttacattactta
acgatcttaatggcaaaattcaatgactataaagatctttctatgcttgaattctcagaa
tttatcagactgaatattaacgatagtattccaaaagcaacaaaaggaaaaggaaagatt
ttttatgaaaacaacacattccaaagcgtctacttatgtgtaaatatatctgaagattta
agctatcacagaacagtccataaggcaaaaggagatgaatttgataacgttctattaatt
ttaaaagaagaaaaagatttaaaatttatgtatgaaccagatttatacaattatacacag
gaagaacatagaatttattatgtaggagcaagtcgtgcaaaagatcaactttttatttca
gttccaacacttgatgctaatgttgaagacataataaaagatatggtaaacgttgaaaga
ttttaa
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