Chryseobacterium sp. Y16C: MKS83_20955
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Entry
MKS83_20955 CDS
T11021
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chrt Chryseobacterium sp. Y16C
Pathway
chrt03420
Nucleotide excision repair
chrt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MKS83_20955
03430 Mismatch repair
MKS83_20955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrt03400
]
MKS83_20955
Enzymes [BR:
chrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MKS83_20955
DNA repair and recombination proteins [BR:
chrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MKS83_20955
MMR (mismatch excision repair)
Other MMR factors
MKS83_20955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
SLFN-g3_helicase
AAA_30
AAA_11
ABC_tran
T2SSE
NACHT
Motif
Other DBs
NCBI-ProteinID:
UMQ41839
LinkDB
All DBs
Position
complement(4591101..4593140)
Genome browser
AA seq
679 aa
AA seq
DB search
MDSKLKPIEHIKQIIDDNQDAEKEFKNFVLQGGAGSGKTESLKQILEYISDTYPDKKGVC
ITLTNVAVDEIKARIGENKNFIVSTIHSFLNDLIKDYKKNIHEVIFEIFKVEKIIRKELD
TGEDEKEYKKNEHEKYKKLYGKYAGKLFTTTGEKTSKVIGKREYDKEPTKFNNDLNIEAD
KLNEKILEIIKSIDYNKIRYNETRYNKFNELSFGHDELLHIASLLFKKHSLLGKIVSDKF
DFILIDEYQDTNEKIVDIFLNSIPKNNKTTIGFFGDSMQGIYDDGIGDVEKEITENKLIK
IEKEDNFRCSDKVIDFINTIRNDGLEQNLALKNAETSEDRKGEVKLYYSIYDKKPTTHSS
FEDKDKYFEYLNQLITKVSADNPEVKKLMLTNKSISNELGFRILYQIFNDRYTEVKEEIE
KTLERIQLIEIYELCSAYKNKNYNFVFVKLRKCGFELKSVKDKIRIKRLFDELLNTNQSV
NEVLKFAFDNKLISKSDSYKQYISNRDAYLENLKNDVRFQYLESLYFDEGNSSTKMTAKD
ASVSTEEFEEFEKNLKRKIFYNDLFSEKLKFPEVLNYYNYIDENNTSDYITMHKTKGSGI
ENVMVVMDEYFWNKYNFRTIYDDEEDLSKKLKNKKLFYVACSRTIKNLICVRLVSDEKEE
KQLLTFFKGVEIKKVDYNT
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaaactaaaaccaatcgaacatataaagcaaattattgatgataatcaagat
gctgaaaaagaatttaaaaattttgttttacaaggcggagcaggaagtggaaaaacagaa
tctttaaaacaaattcttgaatatatttctgacacttatccagacaaaaaaggtgtttgt
attacactaacaaatgttgcagttgatgaaattaaagctagaattggagaaaataaaaat
ttcattgtttctacaatacactcttttttaaacgatttaattaaagattataaaaaaaat
attcacgaagtaatctttgaaatttttaaagtagaaaagattattagaaaagaactagat
actggagaagatgaaaaggagtataaaaagaatgaacacgaaaaatataaaaaattatat
ggaaaatatgctggcaaactatttacaacaactggagaaaagacttctaaagttataggt
aagagagaatacgataaagaaccaacaaaattcaataatgatttaaatattgaagcagat
aaattaaatgaaaaaatattggagattattaaatccattgattataacaaaatccgatac
aacgaaactcgttataataagttcaatgaactatcttttggacacgatgagttattacat
attgcgtctcttctatttaaaaaacattctttattgggtaaaattgtaagtgacaaattt
gatttcatactgattgatgaatatcaagatacaaatgaaaaaatagttgatattttttta
aattcaatcccaaaaaataataaaacaactattggattctttggtgattctatgcaagga
atttatgatgatggaataggagatgtagaaaaagagataactgagaataaattaatcaaa
attgaaaaagaggataattttagatgctctgataaagttattgattttataaatacgata
agaaacgatggtcttgaacaaaatttagctttaaaaaatgctgaaacttctgaagataga
aaaggagaagtaaagttatattattctatttacgacaaaaaaccaaccacacacagtagt
tttgaagataaagacaaatactttgaatatctgaatcaattaataactaaagtttcggcg
gataatcctgaagttaaaaaattaatgttaaccaataaatctatttcaaacgaactaggt
tttaggattctttatcaaatattcaatgatagatacacagaagttaaggaagaaattgag
aaaactttagaaaggattcaattaatagaaatatatgagctttgttctgcttataaaaat
aagaactataatttcgtttttgtaaaactaaggaaatgcggtttcgaattaaaatccgtt
aaagataaaataaggataaaaaggcttttcgatgaattattaaatactaatcaatcagtt
aacgaggtcttaaaatttgcatttgacaacaaattgataagtaaatctgattcatacaaa
caatacatttcaaatagagatgcttatctcgaaaatttaaaaaatgatgttagatttcaa
tatttagagtctttgtattttgatgaaggaaattcatcaacgaaaatgacagcaaaggat
gcttctgtttctactgaagagtttgaagaatttgaaaaaaatcttaagagaaaaatattc
tataatgatttattttctgaaaaattaaaattccctgaagtcttgaattactataattat
attgatgaaaataatacctcagattatataactatgcataagaccaaaggttctggaatt
gaaaatgtaatggttgtaatggacgaatatttttggaacaaatacaattttagaactatt
tatgatgatgaggaagacttatcaaagaagttaaaaaataaaaagcttttctatgtagcc
tgttcaagaacaattaagaatttgatttgtgtgagattagtgtctgatgaaaaagaggaa
aaacaattattaaccttttttaaaggagttgaaataaaaaaagtagactataatacatga
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