Chromobacterium sp. Rain0013: DXT74_00445
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Entry
DXT74_00445 CDS
T11521
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
chru Chromobacterium sp. Rain0013
Pathway
chru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DXT74_00445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chru03021
]
DXT74_00445
03400 DNA repair and recombination proteins [BR:
chru03400
]
DXT74_00445
Enzymes [BR:
chru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DXT74_00445
Transcription machinery [BR:
chru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DXT74_00445
DNA repair and recombination proteins [BR:
chru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DXT74_00445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QOZ81665
LinkDB
All DBs
Position
complement(92027..93010)
Genome browser
AA seq
327 aa
AA seq
DB search
MQNSASEFLKPRLIDVQPVSATHARVSMEPFERGYAHTLGNSLRRILLSSMPGYAPTEVT
IAGVLHEYSALDGVREDVVDILLNLKGVVLKLHGRDSVVLSLKKDGEGAVLAGDIELPHD
VEVINPDHVICHISSGGKIDMEIKIEKGRGYQPVSVRSNHEDNRSIGTIQLDASFSPVRR
VSFAVESARVEQRTDLDRLVLDIETNGVIEPEQAVRNAARILMDQLSIFADLQGTAVEEV
VEKAPPIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASKGLTLGMKLENWPPAGLEKP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagcgcttcggaatttctgaaacctcgtcttatcgacgttcagccggtttcc
gccactcacgctcgtgtgtcgatggagccgttcgagcgcggctacgctcatactctgggt
aattcgctgcgccggattctgctgtcgtcgatgccgggctatgctccgaccgaagtgact
atcgctggcgttttgcatgagtattccgcacttgatggcgtgcgcgaggatgtcgtagac
atcctcctcaacctcaagggcgtagtgcttaagctgcatggtcgtgacagtgttgtgttg
tccttgaaaaaggacggcgaaggcgctgtcttggctggcgatatcgaactgccgcacgat
gtggaagtgatcaatccggaccacgtgatttgtcacatctcttctggcggtaagatcgac
atggagatcaagatcgaaaaaggccgcggctatcagccggtgtcggttcgatccaatcat
gaagacaaccgttccatcggtaccattcaactggatgcttccttctcgccggttcgccgc
gtgagcttcgctgtggaaagcgcccgtgttgagcagcgtaccgacctcgaccgcctggtt
ctcgatatcgagaccaacggcgtgatcgagccggaacaggcagtgcgcaacgctgcccgt
attctgatggatcagctgtcgatctttgccgatctccaaggcacagcggttgaagaagtc
gttgaaaaggcgccgccgatcgatccgatcctgctgcgtccggtagacgatcttgaactg
acggttcgttcggccaactgcctgaaagctgagaacatttattacatcggcgatctgatc
cagcgtactgaaaccgagcttctgaagactccgaacctcggccgcaagtcgctgaacgag
atcaaggaagttctcgcttccaaaggcctgactctcgggatgaaactcgagaactggccg
cctgctggcctcgaaaagccgtaa
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