Chromobacterium sp. Rain0013: DXT74_00865
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Entry
DXT74_00865 CDS
T11521
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
chru Chromobacterium sp. Rain0013
Pathway
chru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DXT74_00865 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chru03400
]
DXT74_00865 (xth)
Enzymes [BR:
chru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DXT74_00865 (xth)
DNA repair and recombination proteins [BR:
chru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DXT74_00865 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QOZ81738
LinkDB
All DBs
Position
complement(167163..167939)
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AA seq
258 aa
AA seq
DB search
MLRIVSANLNGIRSADKKGFFDWLAGIDADFVCVQELKAQAADLSERMRQPDGMTGYFHY
AEKKGYSGVGLYTRHQPDAVVEGLGVDWIDAEGRFLQLDFGNLSVISLYLPSGSSSDERQ
QVKFDFLDVFMPHLETLRAAGRDIVICGDWNIAHNEIDLKNWKGNLKNSGFLPEERAWMT
DLLDRVGWCDVWRRLYPDTPGYTWWSNRGQAYAKDVGWRIDYHIVTPSLMAQARSASVYK
DEKFSDHAPLIVDYERSL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
ttgcttcgaatcgtttccgctaatttgaacggcatccgctccgcggataaaaaaggtttc
ttcgactggttggccggcatagacgccgactttgtctgcgtgcaggaactgaaggcccag
gcggccgacttgtccgaacgcatgcgacagccggacgggatgaccggttacttccactat
gcggaaaagaaaggttatagcggcgtgggcctgtatacccgtcatcagccggatgcggtg
gtggagggattgggcgttgattggatcgacgccgaaggccgttttctgcaactggacttc
ggcaatctcagcgtgatttcactgtatctgccgtcaggctccagcagcgatgagcgccag
caagtgaaattcgattttctggacgtgttcatgccgcatctggaaacgctgcgcgcggcc
ggccgcgacatcgtgatctgcggcgactggaacatcgctcataacgagatcgatctgaaa
aactggaagggcaatctgaagaactccggcttcctgccggaagagcgcgcctggatgacc
gacttgctggaccgcgtgggctggtgcgacgtgtggcgccgcttgtaccccgacacgccg
ggctacacgtggtggagcaaccgcggccaggcttacgccaaggatgtgggttggcgcatc
gattaccacattgtgacgccgtcgttgatggcgcaagctcgcagcgcatcggtatataag
gacgagaagttttccgatcatgcgccgctgatcgtcgattacgagcggagcctgtga
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