Chromobacterium sp. Rain0013: DXT74_01595
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Entry
DXT74_01595 CDS
T11521
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chru Chromobacterium sp. Rain0013
Pathway
chru03420
Nucleotide excision repair
chru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DXT74_01595
03430 Mismatch repair
DXT74_01595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chru03400
]
DXT74_01595
Enzymes [BR:
chru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DXT74_01595
DNA repair and recombination proteins [BR:
chru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DXT74_01595
MMR (mismatch excision repair)
Other MMR factors
DXT74_01595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
DUF8203
Motif
Other DBs
NCBI-ProteinID:
QOZ81866
LinkDB
All DBs
Position
312508..314664
Genome browser
AA seq
718 aa
AA seq
DB search
MTDLLAGLNPEQLRAVTWPDKSALVLAGAGSGKTRVLTTRIAWLLSTGQTSPSGVLAVTF
TNKAAREMQTRLASMVPVNVRTMWIGTFHGLCNRFLRSHYRDAGLPQTFQILDSADQQAA
IKRLLKSLELSNEKFPPRAVQSFINGSKEAGLRADKLPPALNPYEAKLVELYAAYDAQCR
REGVVDFAELLLRSYELLNANQALRQHYCSRFRHILVDEFQDTNRLQYAWLKLLAGDDGS
LFAVGDDDQSIYAFRGAEVGNMRSLLNDFSVSEPVRLEQNYRSMGNILNAANALIEQNDG
RLGKNLWTDAGEGEKIRLFEAYSDGEEAEFITDEVRSLKRDGFNLSDMAILYRSNAQSRL
LEHVLVNAQIPYRIYGGLRFFERQEVKHALAYLRLIANPEDDNALLRVINVPARGIGART
VEGLQAVSREQGVTLWQAACASGGGRTAAKLGEFVLLVERMRERSRELKLAEAVSLAIDD
SGLRAMYEQDKKEGEERLANLDELINAAAGFMPDDPAQALTEFLSAASLEAGEHQAEAGS
DALQLMTVHAAKGLEFDAVFVSGLEEGLFPHENSMNDGKGLQEERRLMYVAITRARQRLY
LSNAQSRMLHGQSRYPIRSRFVDEIPTELTHDLSAKVKAPAKTNASTNASWRTVPKVGRV
AADNSQGFRIGQSVEHAKFGSGVVINAEGGGEDVRLQINFAEHGVKWLDLRYAKLSAG
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacagatctcctcgccggcctcaatccagaacaactgcgcgccgtcacctggcccgac
aagagcgcgctggtgctggccggcgcgggcagcggcaaaacccgggtgctgaccacccgc
atcgcctggctgctgtccaccgggcagaccagtcccagcggcgttttggcggtgaccttc
accaacaaggccgcgcgcgagatgcaaacccggctggcgagcatggtgccggtgaacgtg
cgcaccatgtggataggcaccttccacggcctgtgcaaccgctttctgcgctcgcactac
cgcgacgcaggcctgccgcagaccttccaaatcctggactccgccgaccaacaagcggcc
atcaagcgcctgctgaaaagcctggaactgtccaacgagaaatttccgccgcgcgcggtg
caaagcttcatcaacggcagcaaggaagccggcctgcgcgccgacaagctgccgccggcg
ctcaatccctacgaagccaaactggtggaactgtacgccgcttacgacgcccagtgtcgc
cgcgaaggcgtagtggacttcgccgagctactgctgcgcagctacgaactgctgaacgcc
aatcaggccctgcgccagcactactgcagccgcttccgccacatcctggtggacgagttt
caggacaccaaccgtctacaatacgcctggctcaagctcctggccggcgacgacggttcc
ttgttcgccgtcggtgacgacgaccagagcatctacgctttccgcggcgcggaagtgggc
aatatgcgttcccttctcaacgatttctcggtcagcgagccggtgcgcctggagcaaaac
taccgctcgatgggcaatatcctcaacgccgccaacgcgctgattgagcagaacgacggc
cggctgggcaagaatctgtggaccgacgccggcgagggcgaaaagatccgtctgttcgaa
gcctattccgacggcgaggaagccgaattcatcaccgacgaagtgcgcagcctcaagcgc
gacggtttcaacctctccgacatggccattctctaccgctccaacgcccagtcgcgactg
ctggagcatgtgctggtcaacgcccagattccctaccgcatctacggcggcctgcgcttt
ttcgagcgtcaggaagtcaagcacgcgctggcctatctgcgtctgatcgccaacccggaa
gacgacaacgcgctgttgcgcgtgatcaatgtgccggcgcgcggcatcggcgcgcgcacg
gtggaaggcctgcaggcggtcagccgtgagcaaggcgtcacactgtggcaggccgcctgc
gcctccggcggcggccgcaccgccgccaagctgggcgaattcgtactgctggtggagcgc
atgcgcgagcgcagccgcgaactgaagctggccgaggccgtcagcctggccatagacgac
tccggcctgcgcgcaatgtacgaacaggacaagaaggaaggcgaagaacggctggccaac
ctggacgaattgatcaacgccgccgcgggcttcatgccggacgatccggcgcaggcgcta
accgaattcctcagcgccgccagcctggaagccggcgagcaccaggccgaagccggtagc
gacgcgttgcagctaatgacggttcacgccgccaaggggctggagttcgacgccgtattc
gtctccggcctggaagaaggcctgttcccgcacgaaaacagcatgaatgacggcaagggc
ctgcaggaggaacgccggctgatgtacgtggccatcacccgcgcccgccagcggctctat
ctgtccaacgcgcaaagccgcatgctgcacggccagagccgctatccgatccgctctcgc
ttcgtcgacgaaatcccgacggagctcacccacgacctatctgctaaagtgaaagccccg
gccaagacaaatgcatcgacaaacgcatcctggcgcacggtccccaaagtgggccgcgtg
gccgctgacaacagccagggcttccgcatcggccaatccgtcgagcacgccaagttcggc
agcggcgtggtgatcaacgccgaaggcggcggcgaggatgtgcgtctgcaaatcaacttc
gccgaacacggcgtgaagtggctggatctgcgctacgccaaactaagcgccggctga
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