Chromobacterium sp. Rain0013: DXT74_06280
Help
Entry
DXT74_06280 CDS
T11521
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
chru Chromobacterium sp. Rain0013
Pathway
chru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DXT74_06280 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chru03400
]
DXT74_06280 (recD)
Enzymes [BR:
chru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DXT74_06280 (recD)
DNA repair and recombination proteins [BR:
chru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DXT74_06280 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
RecD_N
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
SLFN-g3_helicase
T2SSE
AAA_25
AAA_24
AAA_16
CbiA
nSTAND3
UvrD_C
AAA_28
SRP54
NTPase_1
Mg_chelatase
TrwB_AAD_bind
Rad17
ATPase
AAA
V-SNARE_C
Motif
Other DBs
NCBI-ProteinID:
QOZ82713
LinkDB
All DBs
Position
1337756..1339453
Genome browser
AA seq
565 aa
AA seq
DB search
MSVQQALLPAELAHLFARLDPGVDEAALALIHELASANQAGHVCLPLAQRPERKALQASA
LVGRPGDYAPLILDAAGRLYFARHWFDEARLAERLAALAEPGPAQDGARLRPLLEALFGS
ASATGPDRQKLAAALAARQRLMVISGGPGTGKTTTVLKLLALLAGLSPRPLVMAMAAPTG
KAAARLSESVRGARERLDLAEETLRQLPQQAQTLHRLLGLRPGAAAPRHHAGNPLPLDVL
VVDEASMIDLSLMARMVEALPSQARLILLGDRDQLASVDAGAVLGDLCANIHYRPDTLEW
LRVNCGETLPPTPGAGGKLTDCVALLTHSHRFGADSGIGELARRVNAGDGAGSWAVLQDP
AWRDVEAVPTLDAAEVLARWRPYWRAVRAGEPLAERQRAFAGFMLLAAERRQVEAFNLRI
ERQLEADGDKPAGRDWYPGRPVMISENDYGLGLFNGDIGFTVQGEAGLRVAFPGDDGGWR
EFAPGRLPQHDTVYAMTVHKSQGSEFGEVCLQLPEAAGPLLNRALVYTAITRARERFVVS
GAQPVWEQAAEAAPQRYSGLADKLK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccagcaagccctgttgcccgccgaactggcgcacttgttcgcccgcctcgat
cccggcgtggacgaggccgcgttggcgctgattcatgaactggccagcgccaatcaggcc
ggccatgtctgcctgccgctggcgcagcgtccggagcgcaaagccttgcaggccagcgcg
ctggttggccgccccggcgattacgctcccttgatcctggacgcggccggccgcttgtat
tttgcccgtcattggttcgacgaagcacggcttgccgagcgcctggccgccctggccgag
ccggggccggcgcaggacggcgcgcgcttgcgtccgctgctggaggccttgttcggttcg
gcatccgcgacggggccggaccggcagaagctggcggcggctctggcggcgcgccagcgc
ttgatggtcatttccggcggtccgggcaccggcaagaccaccaccgtgctcaagttgctg
gccttgctggccggactgtcgccgcggccgctggtcatggcgatggcagcgcccaccggc
aaggccgccgcgcggctgtcggaatcggttcgcggcgcgcgcgagcggctggacttggcc
gaggaaacactgcggcaattgccgcagcaggcgcagactctgcaccgcctgctgggcttg
cgtccgggcgcggcggcgccgcgccaccacgcaggcaaccctttaccgctggacgtgctg
gtggtggacgaggcgtcgatgatagatctgtccttgatggcgcgcatggtggaggccctg
ccgtcccaagcgcggctgattctgctgggcgatcgcgatcagttggcctcggtggacgcc
ggcgcggtgctgggcgatctgtgcgccaacatccattaccggccggacacgctggagtgg
ctgcgggtgaactgcggcgaaactttgccgcccacgccgggcgcgggaggcaaactcacc
gattgcgtggcgctgctcactcacagccatcgtttcggcgccgactccggcattggcgaa
ctggcgagaagggtgaacgccggcgatggcgccggcagttgggcggtgttgcaagatccg
gcttggcgcgatgtggaggcggtgccgacgctggacgcggcggaagtgctggcgcgctgg
cgaccgtattggcgggcggtgcgcgccggcgagcccctggccgagcgccagcgagccttc
gccggtttcatgttgctggcggcggagcggcggcaggtagaggccttcaatctgcgcatt
gagagacaactggaagccgatggggacaagccggccggccgagactggtatccggggcgt
ccggtgatgatcagcgagaacgattacggcctgggcctgttcaacggcgacatcggcttc
acggtgcaaggcgaggccggcttgagggtggcttttcccggagacgacggcggctggcgc
gagttcgctcccggccgcctgccgcagcacgataccgtgtacgcgatgacggtgcacaag
agccaggggtccgagttcggcgaagtctgtttgcagctgccggaggcggcggggccgctg
ctgaaccgggcgctggtgtataccgcgatcacccgggcgcgggagcgcttcgtcgtgtcc
ggcgcgcagccggtgtgggaacaggcggcagaggcggcgccgcaacgttactccgggctg
gccgataaactgaaatga
DBGET
integrated database retrieval system
