Chromobacterium sp. Rain0013: DXT74_08530
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Entry
DXT74_08530 CDS
T11521
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
chru Chromobacterium sp. Rain0013
Brite
KEGG Orthology (KO) [BR:
chru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chru01011
]
DXT74_08530
Enzymes [BR:
chru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DXT74_08530
Peptidoglycan biosynthesis and degradation proteins [BR:
chru01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DXT74_08530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
NMB0315_dom_I
LysM3_NFP
LysM_OapA
SLT_2
SLAM
Motif
Other DBs
NCBI-ProteinID:
QOZ83108
LinkDB
All DBs
Position
complement(1828634..1830454)
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AA seq
606 aa
AA seq
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MNRFTPLALSLSFVFLFASAAHADGAFRQSVGVDEGLAAGLDMMLLNSSLLRNGDNVWER
AREGFQLPEVNAEIVRRQERFYASKPEYFRRTLDRSRKYLFHIMNEVERRGMPTELALLP
LVESAFVPTAKSHVGASGLWQFMPATGRHYGLEQTWWYDGRRDVMEATRAALDYLENLYG
QFGDWNIALAAYNWGEGNVSRAIARLQASGQEVTYENIRMPNETRNYAPKLLAVRNILND
PAKFGVRLDKFPNKPYFVAVSTGKHMNIDIAAKLAGMSISEFKELNPAFNLPVYAHKNGR
QMLIPAAKADKFQANLAKWDKPLLTWEVYTPPADANVSLIASEHGMSAGQLMSANNLSST
SLKAGQPVLVAMSKDQRDIRPLDATDTALPESGDSATLLAQAETPPRAAPAVMVASTQAV
QPSTPVAQAQAPQASALPATALAAAPETTPTQAKAVLVATAPAATAAAVADADGNYTVAA
GDTLYSIARRFNLGLDDLKAANQLDSNTVLVGQVLNVNKTMDKSVTLLADNRASQAQQDA
LLKVSSLQINQRATGSVPAEYVVQRGDTLFSIARRFGVNHNDIQRWNDSRQLTRLQPGQK
VRIQGL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcttcaccccgttggcactttcgctgtcatttgtttttttatttgcctccgcc
gcgcacgcggacggggcgtttcgccaatccgtcggcgtggacgagggcctggccgccggc
ctggacatgatgctgctgaactccagcctgcttcgcaacggcgacaacgtttgggaacgc
gcgcgcgaaggcttccaactgccggaagtgaacgcggagatcgtgcgccgccaggaacgc
ttttatgccagtaagccggaatacttccgccgcacgctggaccgcagtagaaaatatctg
tttcacatcatgaacgaagtggagcgccgcggcatgcccaccgagctggcgctgttgccg
ctggtggaaagcgccttcgttcccaccgcgaaatcccatgtcggcgcctccggcctgtgg
cagttcatgccggccaccggtcgccactacggactggaacagacttggtggtacgacggc
cgccgcgacgtgatggaagccacccgcgcagcgctggactatctggaaaacttgtatggg
cagtttggcgactggaacatcgcgctggccgcctacaactggggcgagggcaacgtctcc
cgcgccatcgcccggctgcaggccagcggccaggaagtgacttacgaaaatatccgcatg
cccaacgaaacgcgcaactacgcgcccaagttgctggcggtgcgtaacattctcaacgat
ccggccaagttcggcgtgcgcctggacaaattccccaacaagccttacttcgttgcggtt
tccaccggcaagcacatgaacatcgacatcgccgccaagctggccggcatgtccatcagc
gaattcaaagaactgaatccggccttcaacctgccggtatacgcgcacaaaaacggccgt
cagatgctgatcccggcggccaaggccgacaagttccaggccaacctggccaagtgggac
aaaccgctgctcacctgggaagtctacactccgcccgcggacgccaacgtcagcctgatc
gccagcgagcacggcatgagcgccggccagctgatgagcgccaacaatctgagcagcacc
tcgctcaaggccggtcaaccggtgctggtggcgatgagcaaggatcagcgcgatatccgt
ccgctggacgccaccgataccgccttgccggaaagcggcgacagcgccaccctgttggcg
caggcggaaacgccgccgcgcgcggcgccggcggtgatggtcgcctcgacccaagccgtc
cagccaagcacaccggttgcgcaggcccaggcgccgcaagcgagcgccctgcccgccacc
gccctggccgccgcgccggaaacgacgccgacgcaggccaaagccgtcctcgtagcgacg
gctcccgcggcaacggctgctgccgtggcggacgccgacggcaattacaccgtggccgca
ggcgacaccctgtacagcatcgcccgtcgcttcaacctcggcctagacgatttgaaagcg
gccaaccagctggactccaacaccgttctggtgggccaagtgttgaacgtcaacaagacc
atggacaagagcgtaacgctgctggcggacaaccgggccagccaggcgcagcaagacgcc
ttgctcaaagtcagcagcctgcagatcaaccagcgcgccaccggcagcgtgccggccgaa
tacgtggtgcaacgcggcgacaccctgttcagcatcgcccgccgctttggcgtcaaccac
aacgatatccagcgctggaacgattcccgccagttaacccggctgcaaccaggccagaaa
gtgcgtatccagggcctgtaa
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