Chromobacterium sp. Rain0013: DXT74_11240
Help
Entry
DXT74_11240 CDS
T11521
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
chru Chromobacterium sp. Rain0013
Brite
KEGG Orthology (KO) [BR:
chru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chru03009
]
DXT74_11240
Enzymes [BR:
chru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DXT74_11240
Ribosome biogenesis [BR:
chru03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DXT74_11240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
Methyltransf_ANTKMT
TRAM
MTS
Methyltransf_11
UPF0020
Methyltransf_32
Methyltr_RsmB-F
Methyltransf_12
Cons_hypoth95
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QOZ83594
LinkDB
All DBs
Position
complement(2403134..2404672)
Genome browser
AA seq
512 aa
AA seq
DB search
MTHKQTIAQVESLDHEGRGVAHVDGKTIFIDGALPYETVVYSAYRKKSSYENANTSQVLK
ESFLRTQPRCPHYGTCGGCSMQHVEFSAQVAVKQRVLEDNLARIGRVKPQQVLTPIAGPA
WHYRHRARMSARLVEKKGGVLVGFHEKRSTYITDMSECHILPRHISDLIVPLREMIYKLS
INNRMPQVELAVGDRVDILVFRNMEAINDADHALLRAFSDTHGSKERPLQMWLQPKGPDT
CYPVYPLDAPKLTYSLPEYRVEMPYYPTEFTQVNPDINAVMVARALKFLDPQPDERIADM
FCGIGNFTLPIARSGAQVHGMEGSQALVKRAVENATHNGLQDKVSYEMANLFEVTEESFA
ALGKFDKMLVDPPRDGAVQLLKAITEDTAPKRIVYVSCNPATLARDANVLVHTKGYTLKA
AGIINMFPHTAHVESVAWFEKTGPCKSRSEIAAIEAAEEAEREAVKAAQRAEAAAEAAKK
ERELAEKAAAKQARRDYYFAEQARREAEQQAQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacaaacagactatcgctcaggtcgaatcgctggaccacgaaggccggggagtc
gcccacgtcgatggcaagaccatcttcatcgatggcgcgctgccgtatgaaaccgtggtc
tacagcgcctatcgcaagaagtcgtcctacgaaaacgccaacaccagccaagtgctgaag
gaaagcttcctgcgcacgcagccgcgctgtccgcattacggcacctgcggcggctgttcg
atgcaacatgtggagttctccgcccaagtggcggtcaagcagagggtgctggaagacaat
ctggcccgcatcggccgggtcaagccgcaacaggtgctgacgcccatcgccggccccgcc
tggcattaccgccaccgcgcgcggatgtcggcgcggctggtggagaaaaagggcggcgtg
ctggtgggcttccacgagaagcgctccacctacatcaccgacatgagcgaatgccacatt
ctgccgcgtcatatctcggacctgatcgtgccgctgcgcgagatgatctacaagctgtcg
atcaacaaccgcatgcctcaggtggagctggcggtgggcgacagggtggatatcctggtg
ttccgcaatatggaagccatcaacgacgccgatcacgccctgctgcgcgccttctccgac
acccacggcagcaaggagcgtccgctgcagatgtggctgcaacccaagggcccggatacc
tgctacccggtctacccgctggacgcgcccaagctgacttacagcctgccggaataccgc
gtggagatgccctactatcccaccgagttcacccaggtgaacccggatatcaacgcggtg
atggtggcgcgcgcgctgaaattcctggacccgcagccggacgaacgcatcgccgacatg
ttctgcggcatcggcaacttcaccctgcccatcgcccgctccggcgcccaggtgcacggc
atggaaggcagccaggccctggtcaagcgcgcggtggaaaacgccacccacaacggcctg
caggacaaggtcagctatgaaatggccaatttgttcgaagtcaccgaggaatccttcgcc
gcgctcggcaagttcgacaagatgctggtggacccgccgcgcgacggcgcggtgcagttg
ctgaaagccatcacagaggacaccgcgcccaagcgcatcgtctacgtgtcctgtaacccg
gccacgctggcgcgcgacgccaatgtgctggtgcacaccaagggctacacgctgaaagcc
gccggcatcatcaatatgttcccgcacaccgcccatgtggaatccgtggcctggttcgaa
aaaaccggcccgtgcaagagccgcagcgaaatcgccgcgatcgaggccgccgaagaagcc
gagcgcgaagcggtgaaggccgcccagcgcgcggaggcggcggcggaagccgccaagaaa
gagcgcgaactggcggaaaaggcggcggccaagcaagctcgccgcgattattattttgcc
gagcaagctcgtcgcgaagcggaacagcaagcgcagtag
DBGET
integrated database retrieval system
