Chromobacterium sp. Rain0013: DXT74_16845
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Entry
DXT74_16845 CDS
T11521
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
chru Chromobacterium sp. Rain0013
Pathway
chru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DXT74_16845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chru03400
]
DXT74_16845
DNA repair and recombination proteins [BR:
chru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DXT74_16845
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DXT74_16845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QOZ84605
LinkDB
All DBs
Position
complement(3688226..3690238)
Genome browser
AA seq
670 aa
AA seq
DB search
MLRTYPNSPFKLHQPFEPAGDQPGAIAQLLEGLSDGLSYQTLLGVTGSGKTYTMANVIAQ
SGRPAIIMAHNKTLAAQLYSEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSI
NEHIEQMRLSATKSILERPDCIIVATVSAIYGIGDPSDYHQMILHLKEGETLAQRDIISR
LATMQYDRNDMDFGRGTFRVRGDVIDIYPAESSDTALRVSMFDDEVETLTLFDPLTGTTK
QRVGRFTVFPSSHYVTPRDTVLRACEHIKEELRARLEWYQKEGKLVEAQRLEQRTRFDLE
MLYEMGFCKGIENYSRHFSGRGPGDPPPTLIDYLPKNALMFIDESHVTVPQVGAMYKGDA
ARKANLVEYGFRLPSATDNRPLKFHEFELLMPQTIFVSATPANYEKEHAGQVVEQVVRPT
GLVDPVMEVRPVATQVDDLLSEIRLRMEKGERVLVTTLTKRMAEQLADYYTEHGIKVRYL
HSDIDTVERVEILRDLRLGVFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSDRSLI
QTIGRAARNLNGKALLYADRITDSMKRAMDETERRRAKQMAFNAEHGIVPRGVEKKIKDI
IDGVYSVENERKKLVDNARVAMMDEKSLAKEIKRLEKEMMEAARNLEFEKAAGLRDQLKH
LKEQAWINDL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcacctatcccaacagtccgttcaaactgcatcaaccattcgagccggccggc
gatcagccgggcgccatcgctcaattacttgaagggctcagcgacggtctgtcctatcag
actttgctaggggtgaccgggtccggcaaaacctacactatggccaacgtcatcgcccag
agcgggcgtccggccatcatcatggcgcataacaaaacgctggcggcgcagctctacagt
gagatgcgggagtttttcccggaaaacgccgtcgagtatttcgtttcttattacgactac
tatcagccggaagcctatgtgcccagccgcgatcttttcatcgagaaagattccagcatc
aacgagcatatcgagcagatgcgcttgtcggcgaccaagtccattctggagcggccggac
tgcatcattgtcgccaccgtctccgccatctacggcattggcgatccttccgattaccat
cagatgattttgcatctgaaagaaggggagacgctggcgcagcgggacatcatcagccgg
ctggccactatgcagtacgaccgcaacgacatggacttcggccgcggcaccttccgagtg
cgcggggatgtgatcgacatctatccggcggaaagcagcgataccgcgctgcgggtcagc
atgttcgacgacgaagtggaaacgctgactctgttcgacccgctgaccggaacgaccaaa
cagcgagtggggcgttttaccgtgtttccctccagccactacgtgacgccgcgcgacacc
gtgctgcgggcctgcgagcacattaaggaagagctgcgcgcgcgactggagtggtatcag
aaggaaggtaagctggtggaggctcagcgcctggaacagcgcacccgttttgacctggag
atgttgtacgagatggggttttgcaaaggcatcgaaaactactctcggcatttctccggc
agggggcctggagatcctccgcccacgctgatcgattacctgccgaaaaacgcgttgatg
ttcatcgacgaatcgcatgtcaccgtgcctcaggtgggcgctatgtacaagggcgatgcc
gcgcgcaaagccaatctggtggagtacggcttccgcttgccgtcggcgaccgacaaccgg
ccgttgaaatttcacgaattcgaattgttgatgccgcaaaccatattcgtgtccgccacg
ccggccaactacgagaaggaacacgctggacaggtcgtggagcaagtcgtacgccccacc
ggcctggtggatcctgtaatggaagtgaggccggtggccacccaggtggacgatctgctg
tccgagatccgattgcggatggagaagggcgagcgcgtgctggtcaccacgctgaccaag
cgcatggctgaacagctggcggattactacaccgagcacggtatcaaggtgcgctatctg
cacagcgacatcgatacggtggagcgggtggaaatcctccgcgacttgcgtttgggggtg
ttcgacgtgttgatcggcatcaacctgctgcgcgaaggcctggacattccggaagtcagc
ctggtggcgattctggacgcggacaaggagggcttcctgcgttcggatcgttccttgatt
cagaccatcggccgcgccgcgcgcaacctcaatggcaaggccttgctctacgccgaccgc
attaccgactcgatgaagcgggcgatggacgagaccgaacgccgccgcgccaagcagatg
gctttcaacgccgaacacggcattgtgcccagaggcgtggagaaaaagatcaaggacatc
atcgacggcgtctacagcgtggagaatgagcgcaagaaactggtggacaacgccagagtg
gcgatgatggacgaaaaatccctggccaaggaaatcaagcgtctggagaaggaaatgatg
gaggccgcgcgcaatctggagttcgagaaagcggcaggcctgcgcgaccaactaaagcat
ttgaaggagcaggcctggatcaacgacctataa
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