Chryseotalea sp. WA131a: KA713_01770
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Entry
KA713_01770 CDS
T08491
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
chrw
Chryseotalea sp. WA131a
Pathway
chrw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KA713_01770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrw03019
]
KA713_01770
03009 Ribosome biogenesis [BR:
chrw03009
]
KA713_01770
Enzymes [BR:
chrw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KA713_01770
Messenger RNA biogenesis [BR:
chrw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KA713_01770
Ribosome biogenesis [BR:
chrw03009
]
Prokaryotic type
rRNA helicases
KA713_01770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Helicase_RecD
Lip_prot_lig_C
Cas3-like_C_2
FlgT_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UXE67359
UniProt:
A0A977Q1N1
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All DBs
Position
376520..378331
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AA seq
603 aa
AA seq
DB search
MKSFDALGLSEQLVEAIRLLGFETPTPIQEQAIPVLLQGKTDLVGLAQTGTGKTAAFGLP
LIQLIDESNRTTQALILAPTRELSVQITTDLENFSKKVKDLNIVTVYGGASISEQIRKVK
RGAQIIVATPGRLIDLIERRVVSLSTISYVVLDEADEMLNMGFKDAIDEILSSTPEEKNV
WLFSATMPREVREISKNYMSNPQELTMGERNQGNENIDHQFIMVDDRDKYLALKRMVDYT
TDIFGVIFCRTKIDTQRVADHLMKDGYNADALHGDLTQAQRDRVMKSFKNKTLQLLVATD
VAARGIDVSNITHVIHMNLPDEIEYYTHRSGRTARAGKKGISLAIVSKKEMGKISQIEKA
LKRRFTKVAVPTGDEVCQKKIMALTQKMRNVEVNEEEIDSFLPEVYHELRDLSKEDIIKR
FASIEFNRFLEYYRDAKDLNKSGSERSRTFSDDGGGSESYSTGDRIFINIGKMDGLEKGD
LLGLICDYGEIDKAKIGKIDLKGAYSFFELEKDVTEKVMKGFEGIEVRGRKVRLEMTSNA
PRERKEGGDFPPRKRRSFDGGGDRGGSRSFGGDRDRGGDRGGKRSYGGGSGGYGGDREKK
KRW
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatttgacgctctggggctctcagagcaattggtggaagcaatccgcctactg
ggctttgaaacgcctacccctattcaagaacaggcgatccctgtgctgttacagggaaag
accgacctcgttgggttggcacaaacgggtacgggaaagacggccgctttcggtctccca
ttgatccaattaattgacgaaagcaatcgcactacgcaggcgttaatcttggcgcctact
cgcgagttgagtgtacaaatcactaccgacctcgaaaatttttctaagaaggtaaaagat
ttaaacattgtaacggtgtatggtggtgccagtatttctgagcaaatcagaaaggtaaag
cgcggtgcacaaattatagtggctacacccggtcgcctcatcgacttgattgagcgcagg
gttgtgagcttaagcacgatcagctatgtggtattagacgaagccgatgaaatgttgaac
atgggttttaaagatgccattgacgaaattttatcaagcactccggaagaaaaaaatgtg
tggctctttagcgctaccatgccgcgtgaagtgcgtgagatttcgaagaactacatgagc
aacccacaagaactaacgatgggtgagcgcaaccaaggcaacgaaaacatcgatcaccaa
tttatcatggtggacgatcgcgataagtacttggcgttgaagcgaatggtagattacacc
accgatatttttggtgttattttttgccgcacaaaaatcgatacacaacgcgtggccgat
cacttgatgaaggatggttacaatgcggatgcccttcatggggatttgacgcaggcacaa
cgcgaccgtgtgatgaagagtttcaaaaacaaaacattgcagttgttggtagctaccgat
gtagcggctcgtggaattgacgtgagcaacatcacacacgtgatccacatgaacttgcca
gatgaaattgaatactatacacaccgaagcggacgaacagcccgtgctggaaaaaagggt
atttcgctggccatcgtttctaaaaaagaaatgggcaagatcagccaaatcgaaaaagcc
ttgaaacggaggtttacaaaagtggcggtgccaaccggtgatgaggtatgtcagaaaaag
ataatggcgcttacgcagaaaatgcgaaatgtagaggtaaacgaagaagagatcgatagc
ttcttgcccgaagtttatcatgagcttcgcgatttaagcaaagaagatatcatcaaacgt
tttgcttccatcgagttcaatcgtttcttggaatactaccgcgatgccaaagatttgaat
aagagcggcagcgaacgcagccgtactttttctgatgacggtggtggcagcgaaagctat
tccacgggcgatcgcatcttcatcaacatcggtaagatggacggattggagaagggcgac
ttgctgggtttaatctgcgactatggtgaaatcgacaaggccaaaattggtaaaattgac
ttgaaaggagcgtactctttctttgaattggaaaaagacgtaactgaaaaagtcatgaaa
ggctttgagggaattgaagtgcgtggccgcaaggtgcgcttggagatgaccagcaatgcc
ccaagagaacgcaaagaaggtggagacttccctccgagaaagagacgctcctttgatgga
ggtggagacagaggtggaagccgctcctttggtggcgatcgtgatcgtggtggcgaccgc
ggaggaaagcgctcgtatggtggcggaagtgggggctacggtggcgatagagagaagaag
aagagatggtag
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