Chryseotalea sp. WA131a: KA713_08295
Help
Entry
KA713_08295 CDS
T08491
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
chrw
Chryseotalea sp. WA131a
Pathway
chrw02020
Two-component system
chrw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chrw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KA713_08295 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KA713_08295 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chrw03021
]
KA713_08295 (rpoN)
Transcription machinery [BR:
chrw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KA713_08295 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Tma16
Ribonuc_red_sm
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UXE68557
UniProt:
A0A977LB17
LinkDB
All DBs
Position
complement(1845590..1847065)
Genome browser
AA seq
491 aa
AA seq
DB search
MQRLGLNQSLQQKLSPQQIQFIKLLQVPTAELEARIEEELELNPVLEQGEEEEGPDETPT
EVEQEEPTTDEPEPEKEDKNEELDIDDYLRDDDYASYKTQVEHDDEEEREMPMAMGTSLH
ETLLTQLGFLGLDERQTIIGKQLVGSIEGDGYIRRELESIVNDLAFSQGIETTLEEVEGI
LKKIQSFDPSGIAARNLQECLLLQLERMDDGQDVDVIVAKRVLSECYEEFTKKHYSKILK
KLDLDDEDYIKDAIELIVRLNPKPGGEMTSGMVKNQYVIPDFILVNNNGKLELSLNSRNA
PELRISRSYSNMMQAYEKSDKKDRKLKEAVSFVKQKLDSAKWFIDAIKQRQHTLLRTMRA
IIDFQYDYFLEGDETKLRPMILKDIAQIIGMDISTVSRVASSKTVQTDFGIYPLKYFFSE
GIATDSGEEVSSREVKQIIKDLIESEDKSKPFPDDKLEDLLNEKGYNIARRTVAKYREQL
NIPVARLRKEI
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtctcggactaaatcagtcattacaacaaaaactatctcctcagcagatacag
tttattaagctattgcaagtgcccaccgctgagctagaagcacgaattgaggaagagttg
gagttaaaccccgtattggagcagggcgaagaggaggaagggcctgatgaaacacccact
gaggtagagcaagaagagccaaccacagacgaacccgaacctgagaaagaagacaagaac
gaagagcttgatattgatgattatttgcgtgacgatgactatgccagttataaaacgcaa
gtggaacatgatgatgaggaagagcgcgaaatgccgatggccatgggcacctcattgcac
gaaaccttgcttacacagctcggttttttgggattggatgagcggcaaaccattatcggc
aaacagttggtgggcagcattgaaggtgatggctacatccgcagagagttagaatcaatt
gtaaatgacttagccttttctcaaggcattgaaaccacattagaggaagtagaagggatt
ttaaaaaaaatacaatcctttgatccatcgggtattgcggctcgcaacttgcaagagtgc
ttgttgcttcagttggagcggatggacgatgggcaagatgtggatgtaatagtggccaag
cgtgtgttaagcgaatgctacgaagagttcaccaaaaaacattattcaaaaattttgaag
aaattggatttggatgatgaggactacattaaagatgccattgaattgattgttcggcta
aaccccaagccaggcggagagatgacgtccgggatggtgaaaaaccaatacgttattcca
gattttattttggtgaacaacaacggcaaactcgagctttcgctaaactcaagaaatgca
ccagagcttcgcatcagccgctcgtattcgaatatgatgcaagcctatgaaaagagcgac
aagaaagatcgcaagctcaaagaagctgtatcctttgtgaagcagaagttagattcagcc
aagtggtttatcgatgctatcaagcaacgccagcacaccttgctccgaaccatgcgcgcc
atcattgattttcaatacgattattttttggaaggcgatgaaacgaaacttaggccgatg
atcctgaaagacattgcgcaaatcattggcatggatatctcgactgtgagtcgtgtggcc
agcagcaaaaccgtgcaaaccgatttcggtatttatccgctgaaatattttttctcagaa
ggcattgccaccgattcgggagaagaagtaagtagccgcgaggtgaaacagattatcaaa
gacttgattgagagtgaagacaaaagcaaaccttttccagatgataagctagaagacttg
ctcaacgagaaagggtacaacattgctaggcgcaccgtggccaaataccgcgaacaattg
aacataccggtggcgagacttagaaaagaaatctga
DBGET
integrated database retrieval system
