Chryseotalea sp. WA131a: KA713_21025
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Entry
KA713_21025 CDS
T08491
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
chrw
Chryseotalea sp. WA131a
Pathway
chrw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KA713_21025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrw03019
]
KA713_21025
Enzymes [BR:
chrw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KA713_21025
Messenger RNA biogenesis [BR:
chrw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KA713_21025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SUa-2TM
CMS1
AAA_22
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UXE66881
UniProt:
A0A977Q134
LinkDB
All DBs
Position
complement(4560108..4561382)
Genome browser
AA seq
424 aa
AA seq
DB search
MSFEKLNLIEPILRALKTEGYTTPTPIQEKAIPIVLERKDLLGCAQTGTGKTAAFAIPIL
QLLHQDELYKASVGISSLILTPTRELAIQIGESFSAYGRHLKLKHTVIFGGVSQKSQTDA
LRAGVNILIATPGRLLDLMNQRYVKLDHIKIFVLDEADRMLDMGFIHDVKKVIAKLPVKR
QTLFFSATMPKEISSLANSILTNPARVEVTPVSSTANTIQQSLYFVDKKNKKNLLVDLLK
DKSIETALVFTRTKHGADRVAMDLNKVGIFTEAIHGNKSQNARQRALSNFKLQKTRVLVA
TDIAARGIDIDNLSTVINYEIPNIPETYVHRIGRTGRAGASGNSISFCDFEEKEFLKDIQ
KLIGKPIPVVENHKYPMTVMHVESKEKSNAPHQRRSGGNKSSANQSSSKSTRSGNSWGRQ
KRYT
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgaaaaattaaatcttattgagcctatccttcgggcgctaaaaacagaaggc
tacaccacccctacacccattcaagaaaaggctattccgatagtattggagcgcaaagat
ttgctcggctgcgcacaaaccggcacaggcaaaacagcagcctttgctatacccattttg
caattgctgcatcaagatgaattgtataaagctagtgtaggcattagctcgttgatcctc
acccctacgcgcgagttggccatacaaattggcgaaagtttttcagcttacggacgtcat
ttgaaattaaagcacaccgtcatctttggtggtgtatcgcaaaaatcacaaaccgatgct
ttgcgggcgggcgtgaatattctgatagcaacgcctgggcgattgcttgatttaatgaac
cagcgttacgtgaagttagaccacatcaagatttttgtgctggacgaagccgatcgaatg
ttggatatgggcttcattcatgatgtaaaaaaagttattgccaaactgcccgtgaagagg
caaacccttttcttctcggccaccatgccaaaagagatttcttcactggccaattcaatt
ttaacaaacccagcgcgtgtggaggttactcctgtttcatctaccgccaacaccatacag
caatcgctttattttgtggacaagaaaaacaagaaaaacttgttggttgatttattgaaa
gacaaatccatcgaaacggctttggtgtttacccgcaccaagcacggagccgaccgcgtg
gcgatggacttaaacaaagttgggatttttacagaggccattcacggtaacaagtcgcaa
aacgcacggcagcgagcgctgagcaattttaaattgcaaaagacccgtgtattagtagct
actgatattgcagcccgtggcattgatattgataacttatcgactgttatcaactacgaa
atccccaacattcccgaaacgtacgtccaccgaattgggcgcacaggccgtgcgggcgct
agcggcaactccatttcgttttgcgactttgaagaaaaagagtttttgaaggacattcaa
aaattgatcggtaaacccattcccgttgtagagaatcacaaatacccgatgaccgtgatg
cacgttgaatcaaaagagaaatccaacgcaccgcatcaaaggcggtcgggaggaaacaaa
tcttccgctaatcaatcttcaagtaaatctaccagatcaggaaatagttgggggaggcag
aagaggtatacgtag
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