Chryseobacterium sp. T16E-39: CEY12_00580
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Entry
CEY12_00580 CDS
T04952
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
chry
Chryseobacterium sp. T16E-39
Pathway
chry03030
DNA replication
chry03430
Mismatch repair
chry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEY12_00580 (holA)
03430 Mismatch repair
CEY12_00580 (holA)
03440 Homologous recombination
CEY12_00580 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chry03032
]
CEY12_00580 (holA)
03400 DNA repair and recombination proteins [BR:
chry03400
]
CEY12_00580 (holA)
Enzymes [BR:
chry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEY12_00580 (holA)
DNA replication proteins [BR:
chry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEY12_00580 (holA)
DNA repair and recombination proteins [BR:
chry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEY12_00580 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
Calici_coat
Motif
Other DBs
NCBI-ProteinID:
ASK28695
UniProt:
A0A220S644
LinkDB
All DBs
Position
133330..134367
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLILKNIKNKEVLPIYFFHGDEPYFIDVAIKALEHNFLEEDEKAFNQTVTYGKDTS
YQEILSLARQFPMMGDKQVIIVKEAQDLKLNEEENRILEAYVENPVPSTVLVFAHKHKKL
DSRKKVTKALDKAKVLFLSESIRDNNLPKWIADECIQLNIKTAPNISHLLAEYLGNDLSR
IANELGKLKIILKEGEVLDGTIIENHIGISKEYNVFELQKALGTKNANAAFKIAHFMGKN
PKNNPFVMMLASLYNYFSNVIIYQTMAGQPPQVIASQMGINPYFIKDYAETARLYPLKHA
TRVVSILREFDMKGKGLGAVNMSEGELIKELVYKIINVDKFKMKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaaatattaaaaataaagaagttttaccgatttat
tttttccacggagacgaaccttattttattgatgttgctataaaggcgcttgaacataac
tttttggaagaagatgaaaaggcgttcaatcagacagtgacctacgggaaggatacttcc
tatcaagagattctttctttagcaagacagtttcctatgatgggagacaagcaggtgatc
attgtaaaagaggctcaggatttaaaactcaatgaagaagaaaacagaattctggaagct
tatgtagaaaatccggtgccttctacggttctggtttttgctcataaacataagaaactc
gatagcaggaaaaaagtaacaaaggctctagataaagccaaagtgcttttcctcagtgaa
tcgatcagagataataatcttccaaaatggattgcagatgaatgtattcagttaaatatc
aaaactgcacctaatatttcacaccttttagccgaatatttaggtaatgacctgtccaga
attgccaacgaacttggtaaattaaagatcattcttaaagaaggtgaagttctggatgga
acaattatcgaaaaccatattggcattagtaaggaatacaatgtatttgaacttcaaaag
gctttaggaacaaagaatgctaatgcagcatttaaaattgcccattttatgggaaaaaat
cctaaaaataatccttttgtaatgatgttggccagtctgtataactacttttcaaatgta
attatttatcagacgatggcagggcaacccccacaggtaattgcttctcaaatgggaatt
aatccttattttatcaaagattatgctgaaacagcaagattatatcctttaaagcatgcg
acaagggttgtttctattttaagggaatttgatatgaaaggaaagggacttggggctgtg
aatatgagcgaaggagaattgatcaaggaattggtgtataagattattaatgtagataag
tttaagatgaaggtttaa
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