Chryseobacterium sp. T16E-39: CEY12_05115
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Entry
CEY12_05115 CDS
T04952
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chry
Chryseobacterium sp. T16E-39
Pathway
chry03030
DNA replication
chry03430
Mismatch repair
chry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEY12_05115
03430 Mismatch repair
CEY12_05115
03440 Homologous recombination
CEY12_05115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chry03032
]
CEY12_05115
03400 DNA repair and recombination proteins [BR:
chry03400
]
CEY12_05115
Enzymes [BR:
chry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEY12_05115
DNA replication proteins [BR:
chry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEY12_05115
DNA repair and recombination proteins [BR:
chry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEY12_05115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ASK29524
LinkDB
All DBs
Position
1159763..1160317
Genome browser
AA seq
184 aa
AA seq
DB search
MDFCAIDFETATNDRSSACELGICIVQDSRIVETKTWLIKPPSFPYFSRFNVAVHGIEPE
DVKDSPTFDEIWHEVEEMMYGTLMIAHNASFDAGVLRGCLKHYDIFAPKLNYLCSIQLAK
KSWNYLPKYGLKHLSEYHQINFNHHRAGDDAEACAKISLLAFEKLFLSSNDEIHDYLKAK
IKQL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggatttttgtgcaatagatttcgaaactgccaccaatgatagaagttcggcttgtgaa
cttgggatttgtattgttcaggactcccggattgtagagactaaaacctggcttattaag
cctccaagctttccttattttagcaggtttaatgtagctgttcatggcatagagcctgaa
gatgtaaaggactcccctacctttgatgagatctggcacgaagtggaagaaatgatgtat
ggaacattaatgattgcacacaatgcaagttttgatgctggagtattgagaggatgttta
aagcactatgatatatttgctccaaaactaaattacctatgcagtattcaattggcaaag
aaatcctggaattatctcccgaagtatggattaaaacacctgtcagagtatcatcagatc
aactttaatcatcatagagctggagacgatgcagaagcctgcgctaaaatttcgttgtta
gcttttgaaaagctatttctaagcagcaatgatgaaattcatgactacctgaaagctaaa
attaagcaattataa
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