Chryseobacterium sp. T16E-39: CEY12_07995
Help
Entry
CEY12_07995 CDS
T04952
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chry
Chryseobacterium sp. T16E-39
Brite
KEGG Orthology (KO) [BR:
chry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chry03032
]
CEY12_07995
03400 DNA repair and recombination proteins [BR:
chry03400
]
CEY12_07995
Enzymes [BR:
chry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CEY12_07995
DNA replication proteins [BR:
chry03032
]
Prokaryotic type
DNA Topoisomerases
CEY12_07995
DNA repair and recombination proteins [BR:
chry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CEY12_07995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ASK30055
UniProt:
A0A220SA25
LinkDB
All DBs
Position
1772309..1773412
Genome browser
AA seq
367 aa
AA seq
DB search
MDNDDFDLISHLKPSKIVKIMKDPVASAKAVNLIYTSDTETAGIIRKRRGKKYSYFKDGE
RLKDQDEITRINKLVIPPAWENVWICALDNGHLQATGFDIKKRKQYKYHSLWSALRNHTK
FYRMLQFGYALPEIRLQVEKDLALRNFEKRKILALIVSLMQRTNIRIGNNAYEKLYGSFG
LTTLKDKHVKINGQKMTFSFKGKKGVMHNVDLKSRKLARLVQKCKDIPGKELFQFYDDEG
NRHSIDSGMVNDYIKEISGEDFTAKDFRTWSGTVSALIAFKEIGYAENNTEYKKKVKEAL
DIVASHLGNTSTVCRKYYVHPLVINLYENNTIKKYLDELEDIEVNDGRADLTQEEKLVLK
ILENEKM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggataatgacgactttgatttgatctcccaccttaaaccttctaagattgttaagatc
atgaaagatccggtggcttctgcaaaggctgtaaatcttatttacacctccgatacagaa
accgccggaattattcgtaaaagaagaggaaaaaaatattcctattttaaagatggagaa
cggcttaaagatcaggacgaaattaccagaattaataaactggtaattcccccggcatgg
gaaaatgtatggatctgcgccttagataacggtcatttgcaggcaaccggatttgatata
aaaaaaagaaaacaatacaaatatcattcactctggagcgcattgcgaaaccataccaaa
ttttaccggatgcttcagtttggatatgctttacctgaaattcgcctgcaagtggaaaaa
gatctggcattgagaaattttgaaaaaagaaagatccttgccttaattgtaagtcttatg
cagcgcaccaacatcagaattggaaataacgcttatgaaaaactgtatggatcttttgga
ctcactaccttaaaagacaaacatgttaagatcaatggacagaaaatgaccttttcattc
aaaggaaaaaaaggcgtcatgcacaatgttgatcttaaaagtagaaagctggcaagactt
gtgcagaaatgtaaagatattcccggaaaggaacttttccagttttatgatgatgaagga
aaccggcattctatagattcaggaatggtgaatgattatatcaaagaaataagtggtgaa
gattttacggcaaaagatttcagaacctggtccgggacggtaagtgctttgatcgccttt
aaagaaattggttacgctgagaacaatacagaatataaaaagaaagtaaaagaagcactg
gatattgtggcttcacatctcggtaataccagtacagtttgcagaaaatattatgtacat
cccttagttatcaatctctacgaaaacaataccattaagaaatatcttgacgagctggaa
gacattgaagtaaatgatggccgggcagatttaacccaggaagaaaaactggtattaaaa
atccttgaaaacgaaaaaatgtaa
DBGET
integrated database retrieval system
