Chryseobacterium sp. T16E-39: CEY12_09950
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Entry
CEY12_09950 CDS
T04952
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
chry
Chryseobacterium sp. T16E-39
Pathway
chry02020
Two-component system
chry02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chry00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CEY12_09950 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CEY12_09950 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chry03021
]
CEY12_09950 (rpoN)
Transcription machinery [BR:
chry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEY12_09950 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Med9
Motif
Other DBs
NCBI-ProteinID:
ASK30410
LinkDB
All DBs
Position
complement(2195642..2197105)
Genome browser
AA seq
487 aa
AA seq
DB search
MLKQHLQLKLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEIAKEESKEDDYAS
LEDSYENEGNESIETDFDVNEYIYDDEPSYKTASSNYSADDEEFDNESLLTEGQSLYDYL
LEQIHLANINPEDIKIAEYIIGNLDTDGYLRREIKSIVDDLAFSQGIYTTIEKAEDILEN
YVQKLDPAGVGARGLQECLLLQIEKKVSSDKAVSLAANILRHQFDALTNKHYNKIIQKYD
IEEEDLKDALEEISKLSPKVGGNFDTQTITINQEIIPDFVIQVKDGVVIPMLNSKNAPTL
RVSEEYKDILTTYSHDKNSSEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTITAIVKF
QKEYFITGDEKSLKPMILKDIADITGFDISTISRVVKSKYADTPNGIVYLKDLFSDSLTN
DDGEEVSTKEIKTHLMEVISKENKRKPLTDDALVVILKEQGYNIARRTIAKYREQLNIPV
ARLRKEL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaacacttacaactcaagttagggcaaaagttggctccgcaacagattcaa
ttgatgaagctgattcaacttcatactttggaatttgaagaggaactggagagagagtta
gaagaaaaccctgccttggaaattgcaaaagaagaatctaaagaagatgattatgcgtct
cttgaggattcctatgagaatgaaggaaatgaaagcattgaaacggattttgatgtgaat
gaatatatctatgatgatgaaccgagctataaaacagcttccagtaattattcagctgat
gatgaggaatttgataatgaaagtttactgacggaaggtcagtctttatatgattatcta
ttagaacaaatccacttagctaatattaatcctgaggatataaaaattgccgaatatatt
attggaaaccttgatacggatggctatctgagaagagagatcaaatcgattgttgatgat
cttgccttttcacagggaatttatacaacaatagaaaaggctgaagatattttagaaaat
tacgttcagaaactggatcccgcaggagttggtgcaagaggtctgcaggaatgccttctt
ttacaaatagaaaagaaagtaagttcagacaaagcagtttctttggctgccaatatcctg
agacatcagtttgatgctcttaccaataaacattataataagatcattcagaaatatgat
atcgaagaagaagaccttaaggatgctttggaagagatttccaaattatccccaaaagtt
ggaggaaactttgatacacagacgataacgatcaatcaggagattattccggattttgta
attcaggtgaaagatggggtagttattccaatgcttaacagtaaaaatgctccgacttta
agggtttctgaagaatataaagatattttaaccacttattcccacgataagaattcttct
gaacataaacaggcggcattatttatcaagcaaaagttagatgctgcaaaatggtatatc
gatgcgattaaccagcgtcagaatacactattgcaaaccatcactgctattgttaaattc
cagaaagaatactttatcacaggtgatgaaaaatctttaaaacctatgatcttgaaagat
atcgctgatatcaccggttttgatatttctactatttcaagagtggtaaaaagtaaatat
gcagatacacccaacgggattgtataccttaaagacctgttctctgatagtttgaccaat
gatgatggagaagaggtatctaccaaagagattaaaacccaccttatggaggtgatcagc
aaggagaacaaaaggaagccacttacagatgatgctttagtggtaatcttaaaagaacag
ggatataacatagcccgaagaaccattgcaaagtacagggaacagcttaatatacctgtt
gcgagattgagaaaagaactttaa
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