Chryseobacterium sp. T16E-39: CEY12_11915
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Entry
CEY12_11915 CDS
T04952
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
chry
Chryseobacterium sp. T16E-39
Brite
KEGG Orthology (KO) [BR:
chry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chry03009
]
CEY12_11915
Enzymes [BR:
chry01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CEY12_11915
Ribosome biogenesis [BR:
chry03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CEY12_11915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Cons_hypoth95
Methyltransf_15
TRM5-TYW2_MTfase
MTS
N6_N4_Mtase
Methyltransf_11
Methyltransf_4
RrnaAD
PCMT
PrmA
NpmA
Motif
Other DBs
NCBI-ProteinID:
ASK30774
UniProt:
A0A220SB73
LinkDB
All DBs
Position
complement(2637986..2639392)
Genome browser
AA seq
468 aa
AA seq
DB search
MRKKKDIILENIKLLTAGAKGVAIGKTEEGKTVLVSGGIPGDVVNARVKKSKSKYFEAET
LEVVEKSPFRVDAKCIHFGICGGCKWQNMSYEKQLDFKQEEVYNNIKRIGGIEDFETIPI
LGAEEQYFYRNKMEFSFSNARWLTQYEISSEENFGSKDALGFHIPGMWSKILDLKECFLQ
EDPSNAIRLAVKNYGVENGFDFFDVRNQEGFLRTLMMRQNSKGEWMVLFQLYREEAENRE
KLFEFLLSKFPQIKTLVYAINPKQNDSIYDLDINVYFGEGFLMEEMDGLKFKIGPKSFFQ
TNYKQALELYRKTLEFADLKGDEVVYDLYTGTGTIAQYVARKAKQVIGIESVQEAINAAI
EHAELNGLTNCTFYCGDMKNVFNDEFLENHPKADVLITDPPRDGMHQKVVEQILKLSPEK
VVYVSCNSATQARDLALMKDHYNVVKILPVDMFPQTHHVENIALLIKK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaagaaagatattattcttgaaaatattaaacttttaaccgcaggtgctaaa
ggagtagccataggaaaaacagaggaagggaagacggttttggtttcaggaggtattccg
ggagatgttgttaatgcaagagttaaaaagtctaaatctaaatattttgaggctgaaact
cttgaggttgttgagaagtctccatttagggtagatgctaaatgtattcactttggaatt
tgtggcggctgcaaatggcaaaatatgagctatgaaaagcagttggattttaaacaggag
gaagtttacaataatataaaaaggattggtggaattgaagattttgaaaccattccgatc
ctgggtgctgaggaacagtatttctacaggaataaaatggaattctcattttcaaatgca
agatggcttacacagtatgaaataagctcagaagaaaactttggcagcaaggatgcttta
ggttttcatattccggggatgtggagtaagattctagatcttaaagaatgtttccttcag
gaggatccgtcaaatgcgatccgtctggcagtgaaaaattacggagttgaaaatggattt
gatttctttgatgtaagaaatcaggaaggatttttgagaactttgatgatgaggcaaaac
tccaaaggagaatggatggttttgtttcagctttacagagaagaggctgaaaacagagag
aagctttttgagtttttattaagtaagtttccacaaattaaaaccttggtctacgctatt
aatccaaaacaaaatgattccatttacgatttagatattaatgtttattttggagagggc
tttttaatggaagagatggatgggctgaagtttaaaatcggaccaaaatctttttttcaa
accaattacaagcaggctttggaactgtacagaaaaacgttagagtttgccgacctgaaa
ggtgatgaagttgtctatgatctttacacgggaacaggtactattgcgcaatatgtagcc
agaaaagcaaagcaggtgatcggaatagagtcagttcaggaagctattaatgcagctatt
gaacatgctgaattaaatggtcttaccaattgcactttctattgtggagatatgaaaaat
gtctttaatgatgaattcttagaaaatcatccaaaggctgatgtactcattacagatcct
ccaagagacgggatgcatcagaaggttgtagagcagatcttaaaactttctcctgaaaaa
gtggtgtatgtaagctgtaattctgcaactcaggcaagagatctggctttgatgaaggat
cattacaatgttgtaaagatattaccggtggatatgttccctcaaactcatcatgttgag
aatattgcattgcttataaaaaaataa
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