Chryseobacterium sp. T16E-39: CEY12_16790
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Entry
CEY12_16790 CDS
T04952
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
chry
Chryseobacterium sp. T16E-39
Pathway
chry03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chry00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEY12_16790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chry03021
]
CEY12_16790
03400 DNA repair and recombination proteins [BR:
chry03400
]
CEY12_16790
Enzymes [BR:
chry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEY12_16790
Transcription machinery [BR:
chry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEY12_16790
DNA repair and recombination proteins [BR:
chry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEY12_16790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ASK31669
UniProt:
A0A220SDP5
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All DBs
Position
3695685..3696680
Genome browser
AA seq
331 aa
AA seq
DB search
MAILQFIKPDKVILLNSDEFKGQFEFRPLEPGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQVRLKSTAENQSNEQVVAKVSGQTIITAGDLGKSIN
GFEILNPELVICNLNSDVTFEITFNVEKGRGYVPSEQNKSNNAPVGTIAIDSIFTPIKKV
QYSIENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLADMDLSVRALNCLKAAEVETLGELVSYSKSDLMKFRNFG
KKSLTELEELVHSKGLNFGFDVAKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacaattcataaaacccgataaagtaattttacttaactctgatgaattt
aaaggtcaatttgaattcagacctttagaaccaggtttcgggcttacaataggtaatgct
ttaagaagagtattgctttcttctctggaaggatatgctatttcatctatcaaaatagaa
ggtgtagagcacgaattttcaactattccaggagtaatcgaagacgtaactgaaattatt
cttaaccttaagcaggtgagattaaaatctacagcagaaaaccagtctaatgagcaggtt
gttgctaaggtttcaggtcaaacgattattactgctggagatttaggaaaatcaatcaac
ggatttgagatcttgaatcctgagttggtgatttgtaacctaaacagtgatgtaactttc
gaaattactttcaatgtagaaaagggtagagggtatgttccttctgaacaaaataagtca
aacaatgcacctgtaggtacaattgctattgactctatttttactccaattaagaaagta
cagtatagtattgaaaattatcgtgtagagcaaaaaacagactacgaaaaacttgtatta
gatatagaaactgatggttccatcagtcctcaaaatgctttaactgaagcttctaagata
ttaatttatcacttcatgttgttctctgatgagagaatcactcttgaaactgaagccgta
aaagcatctatccaatatgatgaagaaactcttcatacaagacaacttcttaaatctaaa
ctagcagatatggatctttcagtgagagctctaaactgtttgaaggctgcagaagttgaa
acgttaggagaacttgtttcttacagtaagtctgatttgatgaaattcagaaattttggt
aaaaaatctttgacagaactagaagaattagtgcattcaaaaggtcttaacttcggtttc
gacgttgcaaaatataagttagacgctgataaataa
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