Chryseobacterium sp. T16E-39: CEY12_17825
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Entry
CEY12_17825 CDS
T04952
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
chry
Chryseobacterium sp. T16E-39
Brite
KEGG Orthology (KO) [BR:
chry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chry03400
]
CEY12_17825
DNA repair and recombination proteins [BR:
chry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEY12_17825
Archaeal homologous recombinant proteins
CEY12_17825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
PUMA_CC
Motif
Other DBs
NCBI-ProteinID:
ASK31850
UniProt:
A0A220SEA3
LinkDB
All DBs
Position
complement(3931802..3934840)
Genome browser
AA seq
1012 aa
AA seq
DB search
MLPIQLTIEGLYSYQERQTIDFKNLTEAGLFGIFGSVGSGKSSILEAISFALYGETERLN
MRDKRAYNMMNLKSNSSYIEFDFVNHENKLFRATRDFKRNSKKFEDVKPSSVTFYESKNE
KWTPLDHSDAEKIIGLSYANFKRTIIIPQGQFKEFLELGAADRTNMMKEIFNLQRFDLQN
NVSILSNKNRSELDQLQGELKGFEEITEEHINSHKEHLKEEQQKLNGIQKEHEQVSGKYQ
QLKNLKTDFESLQQKREDFEKISAEKIKIDELEKKTELYDIIFRLFSPLLDIKNRLSGEI
SDRQKELQTHTKAVEETEKSFTSIKEQIHALQPEFDVLNQSKITENDLGLILQIQKYSTE
IKALEERTQKGSEKVQEIEEKQKLSQSKINTLTKETNALRTKKVEANVLINVGNWFVQNK
SLNDLQQKQSHKLIELKGLIGKVLEELKPLTVDPLNFKEEFKRKTEVLELSRKESLQKLD
HLKVQKELSHYASKLHEGESCPLCGSSEHPHIIEFHDVHTELNEIQEKIQSDENAISKLQ
KEHTEIEKILDRKKIFEDQLQAEEGVLEQVQKEAQVHRKNFIWIDFNADHENDFELKRQQ
SFTIEKEIEQINQQILKEREIFEKGQEILEKYKKALTDFKVEEAKKEEQINTNRSNLKTL
DWNDYAGTSYQEIQQLHQKLTEKNLEVEKKYHILINQEKEAAPKLAEQKTIVSQLNIRIT
ELEKERSSNEESLQLALLQQRITELTEVQNILKEEVPVQEIRNQIQVFRIQFETLKNGIS
ELETKLKDFSFDQEQFHSVEEQFKILEITLKQANTAVVKTTSEIERLEKEFRKKETLLKT
LAELQKRSDNLKVMTNLFKAAGFVQYVSSIYLRQLCDHANIRFHRMTRNQLSLQLNENND
FEIIDYLNEGRSRSVKTLSGGQAFQVSLSLALALAESVQASTKAEKNFFFIDEGFGTQDL
ESVNIVFETLMGLQKENRIVGIISHVEELKEKIPISLSIIKDEERGSLIEKV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgctccccattcaattaacaatagaaggtttatattcttatcaggagcgtcagaccatt
gattttaaaaaccttacagaagccggtttatttggcatattcggttcggtaggatctgga
aaatcatcaatacttgaagctatttcttttgctctttatggagaaacagagcgccttaac
atgcgcgataaaagggcttacaatatgatgaaccttaaatcgaacagctcatatattgaa
tttgattttgtaaatcatgagaataaattgtttcgcgctacccgggattttaaaagaaat
tcaaagaagtttgaggatgtaaaaccatcttcggtgacattttatgaaagtaagaatgag
aaatggacaccccttgatcactctgatgctgagaagattataggattaagctatgcaaat
tttaagcggacgatcattattccacaaggtcagtttaaagaatttctggagttaggagca
gcagacagaacaaacatgatgaaagagatcttcaatctgcaaagatttgatcttcaaaat
aatgtttcaattttaagtaataaaaacagatctgaactcgatcaacttcagggtgagcta
aaaggttttgaggaaataaccgaggaacatattaattcccacaaagaacacctcaaagag
gaacagcaaaaattgaatgggatacaaaaagagcacgagcaagtttcaggaaaatatcag
cagttaaaaaatttaaaaacagattttgaaagcttacagcaaaaaagagaagattttgaa
aaaatatccgctgagaaaataaaaattgatgagctggaaaagaaaacagagctctatgat
atcatatttaggctttttagccctttacttgacataaaaaacaggctttctggtgaaatt
tcagaccgacaaaaggaactgcaaactcacacaaaagctgttgaagaaacagaaaaaagc
ttcaccagtataaaagaacagatccatgcacttcaacctgaatttgatgttttaaaccaa
tcaaaaataacggaaaatgatctggggctgatcttacaaatacaaaagtattcaacagag
ataaaagcacttgaagaaaggacacagaaaggttctgaaaaagtccaggagatcgaagaa
aagcagaagctcagtcagtcaaaaataaatactcttactaaggaaacaaatgcgttacgg
actaaaaaggtcgaagcgaacgtattaatcaatgttggaaattggttcgttcaaaataag
agcttaaatgatctacagcagaagcaatctcataagctaattgagttgaaaggcttaatc
gggaaggttttggaagagctgaaacctcttactgttgatcctcttaattttaaagaagaa
tttaaaagaaaaactgaggttttagagcttagcagaaaagaatcactgcaaaaactggat
catcttaaagtacagaaagagttatcccattatgccagtaaacttcatgaaggtgaatcc
tgtccgctttgtggttcttccgaacatcctcatattattgaattccatgatgtacataca
gaactgaatgaaattcaggagaaaatacagtctgatgaaaatgccatttcaaaactccag
aaagaacatacggaaattgaaaagattttagatcgtaagaagatttttgaagatcagttg
caggcagaagagggagttttagagcaggttcaaaaggaggctcaagttcatcgcaaaaac
ttcatatggatagactttaatgctgatcatgaaaatgattttgaattaaaaagacagcag
tcatttacgattgaaaaagaaattgaacaaattaatcagcagatcttaaaggagagagaa
atttttgaaaaaggacaagagatccttgaaaaatataaaaaggcattaactgattttaaa
gtagaagaagcaaagaaagaagagcaaatcaatactaatcgctccaatttaaagacttta
gattggaatgattatgcgggtacatcctaccaggaaattcagcaacttcatcaaaaatta
actgaaaagaatctggaagttgagaaaaaatatcatatcctgatcaatcaggaaaaagaa
gcggcacctaaattagctgaacaaaaaacaattgtcagccagttaaatatccgaatcaca
gagctggaaaaagaaagatcttctaatgaagagtctttgcaattggctttgttacaacaa
agaatcactgagctcacagaggtacaaaatattttaaaggaagaagttcccgttcaggaa
atacgaaatcaaattcaagtattcagaattcagtttgaaacattaaagaatgggattagt
gaattggagacaaaactcaaggacttttcttttgaccaagagcagtttcattctgttgaa
gagcagtttaaaattttggaaattacattaaaacaagcaaataccgccgttgtaaaaaca
acttctgaaattgaaagacttgaaaaagagttccggaaaaaagaaacccttttaaaaacc
ctggctgaacttcaaaaacggtctgacaatttaaaagtaatgactaacctgtttaaagca
gctggttttgttcagtatgtctcttccatctacctgagacaattgtgcgatcatgcgaat
atacgattccatagaatgacaagaaatcaattgagtcttcaattaaatgaaaacaatgat
tttgaaatcattgattatctgaacgagggacgaagccgtagtgtaaaaacgttatccggt
ggccaggcatttcaggtttctttgagtctagctctggctttggcagaaagtgttcaggct
tctacaaaagcagaaaaaaacttcttctttatagatgagggcttcggaactcaggacctg
gagtccgtgaatattgtttttgaaacactgatgggccttcaaaaggaaaacagaatcgtt
ggcattatttctcatgttgaagaactcaaagaaaaaattccgatttccctaagtattatc
aaagatgaagaacggggaagccttatagagaaggtataa
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