Chryseobacterium sp. 6424: CO230_00130
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Entry
CO230_00130 CDS
T05704
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chrz
Chryseobacterium sp. 6424
Pathway
chrz03030
DNA replication
chrz03430
Mismatch repair
chrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CO230_00130
03430 Mismatch repair
CO230_00130
03440 Homologous recombination
CO230_00130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrz03032
]
CO230_00130
03400 DNA repair and recombination proteins [BR:
chrz03400
]
CO230_00130
Enzymes [BR:
chrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CO230_00130
DNA replication proteins [BR:
chrz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CO230_00130
DNA repair and recombination proteins [BR:
chrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CO230_00130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
AYO56682
LinkDB
All DBs
Position
complement(25274..26497)
Genome browser
AA seq
407 aa
AA seq
DB search
MYAVIDIESNGAGFRKESIIEIAVFKYDGHTIVDQFISLVNPESEITPFVQKLTNISPKM
VQTAPKFPQIARRIIEITKNCILVGHNIEFDYRMLRQEFKRLGYDFKSHTLDTIPLAQKL
IPEAESYSLGKLVKSLGIPLVDQHRASGDARATLDLFKLLLIKDKDSEIIQQHHEESNGK
SYLNKVRNLTQDLPAEKGILYLQNAKGKIIYFDFVDDLIKAARHIFNAKLKRWESIQQET
EQIQYELTGNDLLARLMMETKGLRKRQSLPYGLFYKNERYITEKIAHEKLHKPLLKFKSF
TQSLKAVNFIKSRQDLQNPQQLTSLISLAGRYQLWLTDGRTLGEKSFLMIENGRLTAYGF
YELHTQINTQKKLSALKIPVEKFPGDLKNDLQLALLRGDFKIQELPK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcagtaattgatatagaaagtaacggagcaggcttcagaaaagaaagtattatc
gaaattgctgtgtttaaatatgatggccataccattgtcgaccagttcatctccttggtg
aaccccgaaagtgaaatcactccgtttgtacagaaacttacgaatatttcgccaaaaatg
gtacaaacagcgccaaaattcccccaaattgcccgcagaattattgaaatcaccaaaaac
tgcattttagtcgggcacaatatcgagttcgattaccggatgctgcgccaggagttcaaa
cgcttgggttacgacttcaaaagccatacattagataccattccgcttgcgcaaaaactc
atcccggaagccgaaagctactcgctggggaaactcgtcaaatcgcttggtatccctttg
gtggaccaacaccgcgcttctggtgacgcacgtgcgacactcgatcttttcaaactttta
ctgattaaggataaagattcagagatcatacagcagcatcatgaagaaagcaacggcaaa
agttatttgaacaaagtacgcaatctcacccaggacctacctgccgaaaaaggcatcctt
taccttcaaaatgctaagggcaaaattatttatttcgattttgtggatgatctcatcaaa
gcggcacggcatatatttaatgcaaaacttaagcgttgggaaagcatccagcaagagacg
gagcaaattcagtatgaacttacaggtaatgacttactcgcacgtctgatgatggaaacc
aagggtctgcgcaaaagacaaagtctcccatacggacttttctacaaaaatgaacgttat
attacagaaaaaatagcacacgagaaactgcataaacctctgcttaaattcaagtccttt
acccaaagcctaaaagcggtgaatttcataaaatcccggcaagatctgcaaaatccccaa
cagttaacaagtcttatctcgctcgcggggcggtaccaattatggcttactgacggaaga
acactgggtgaaaaatccttcctaatgattgagaacgggcggcttaccgcctatgggttt
tacgaactacatacccaaatcaacacacagaaaaaactttcagcgctgaaaattccggta
gaaaagttcccaggcgatttaaaaaatgacctgcaattggcacttttaagaggagatttc
aagattcaggaacttccgaaataa
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