Chryseobacterium sp. 6424: CO230_02145
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Entry
CO230_02145 CDS
T05704
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
chrz
Chryseobacterium sp. 6424
Brite
KEGG Orthology (KO) [BR:
chrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chrz03009
]
CO230_02145
Enzymes [BR:
chrz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CO230_02145
Ribosome biogenesis [BR:
chrz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CO230_02145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
Methyltransf_11
MTS
Methyltransf_15
TRM5-TYW2_MTfase
N6_N4_Mtase
RrnaAD
PCMT
Methyltransf_4
PrmA
UPF0020
2-ph_phosp
NpmA
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AYO57033
UniProt:
A0A3G2TAC2
LinkDB
All DBs
Position
464858..466267
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AA seq
469 aa
AA seq
DB search
MRKKNKNLILENIQLLSAGAKGVAIGKTEEGKTILVAGAVPGDVVNARVKKSKSKYIEAE
ATEIVVASPNRVTPRCVHFGVCGGCKWQNLSYEKQLAYKQDEVYNHIKRIGGIEDFETLP
ILGSPEPYFYRNKMEFSFSNARWLTQTEISSEENFGNRDALGFHIPGMWSKILDLKECWL
QEDPSNYIRLAVKQYAVAHELEFFDVKAQTGFLRTLMLRQNSKGEWMVLFQLFRDEQENR
EKLFDFLLNEFPQIKTLVYCVNSKQNDSIYDQHVVTYHGDGYLMEEMDGLQFKIGPKSFF
QTNYKQALELYRKTLDFADLKGDEVVYDLYTGTGTIAQYVARNAKQVIGIESVQEAINAA
KEHARLNGLTNCTFYCGDMKDIFNDEFLANHPKADVLITDPPRDGMHQKVVEQILKLAPE
KIVYVSCNSATQARDLALMKEHYKLVKILPVDMFPQTHHVENIALLVKI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagaaaaataaaaatctgatcctcgaaaatatacagctgctctctgccggcgcc
aaaggggttgccataggtaagactgaagagggcaaaaccatcctagtcgccggtgcggta
ccgggtgatgtggtaaatgcgagggtgaagaaatctaaatctaaatatatcgaggcagag
gctaccgaaatcgtagtcgcttcaccaaatcgcgtaacgccaagatgtgtgcattttggc
gtgtgtggcggctgcaaatggcaaaatctttcttacgaaaaacagttggcctataaacag
gatgaggtgtataaccatatcaaaagaatcggcggaatcgaggattttgaaacattaccg
atacttggcagtcccgaaccttatttttatcgcaataaaatggagttctctttctctaac
gcacgctggctgactcaaacagaaatcagttccgaagaaaatttcggtaaccgcgatgcg
cttggtttccatattcctggcatgtggagtaaaatccttgatttgaaagaatgctggttg
caggaagatccttccaattatattcgcctggccgtaaagcagtacgcggtcgcgcacgaa
ctcgaatttttcgatgtgaaagcgcaaacaggcttccttcgtacgctgatgcttcgccaa
aactcaaaaggggagtggatggtgctgtttcagttgttccgtgatgaacaggaaaaccgt
gaaaaactatttgattttctgctcaatgagtttccgcagatcaaaacgctcgtatattgc
gtcaactccaagcaaaacgactccatctacgaccaacatgtcgtaacctatcatggtgat
ggctatttaatggaagaaatggatggcttacagttcaagataggtccgaaatcctttttc
caaaccaattataagcaggcccttgagttatatcgcaaaactttggattttgcggattta
aagggcgatgaggttgtgtacgacctttacaccggtactgggaccatcgcgcagtatgtc
gccagaaatgccaagcaagttattgggatagagtctgttcaggaggccatcaatgcggcg
aaggaacacgccaggctcaatgggttaaccaactgcaccttttattgtggggatatgaaa
gacatctttaatgatgagtttttagccaatcaccctaaagccgatgtgctgattaccgac
ccgccgcgcgatggtatgcaccagaaagtggtagagcagatattgaaactggcaccagag
aaaattgtatatgtgagctgtaactctgccacacaagcccgcgatttagcgttgatgaaa
gaacactataaattggtgaaaatcttgccggtcgatatgttcccgcaaacacatcatgtg
gaaaatattgcacttttggtgaagatatag
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