Chryseobacterium sp. 6424: CO230_03125
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Entry
CO230_03125 CDS
T05704
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
chrz
Chryseobacterium sp. 6424
Brite
KEGG Orthology (KO) [BR:
chrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrz03032
]
CO230_03125
03036 Chromosome and associated proteins [BR:
chrz03036
]
CO230_03125
03400 DNA repair and recombination proteins [BR:
chrz03400
]
CO230_03125
DNA replication proteins [BR:
chrz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CO230_03125
Chromosome and associated proteins [BR:
chrz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CO230_03125
DNA repair and recombination proteins [BR:
chrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CO230_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF937
COMMD9_HN
DUF4777
Motif
Other DBs
NCBI-ProteinID:
AYO57206
LinkDB
All DBs
Position
668062..668352
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AA seq
96 aa
AA seq
DB search
MTKAELVSTISNKLGTEKNETQKVVEAFMQEIRTSMYNGDNVYLRGFGSFIIKTRAAKTG
RNISKNTAIEIPAHNIPAFKPSKTFVEKVKTKVAVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagaattggtgagtaccatctcgaataaattggggactgaaaagaatgaa
actcagaaggttgtagaggcattcatgcaggagatcagaacttcaatgtataatggcgac
aatgtttatttaagaggctttggctcattcatcatcaaaactagggctgcaaaaacggga
agaaatatttctaagaacacagcaattgaaatcccggctcacaatattccggcttttaaa
ccatcaaaaacttttgtagagaaagtaaaaaccaaagtagcggtaaaataa
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