Chryseobacterium sp. 6424: CO230_06505
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Entry
CO230_06505 CDS
T05704
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrz
Chryseobacterium sp. 6424
Brite
KEGG Orthology (KO) [BR:
chrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrz03032
]
CO230_06505
03400 DNA repair and recombination proteins [BR:
chrz03400
]
CO230_06505
Enzymes [BR:
chrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CO230_06505
DNA replication proteins [BR:
chrz03032
]
Prokaryotic type
DNA Topoisomerases
CO230_06505
DNA repair and recombination proteins [BR:
chrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CO230_06505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AYO57804
UniProt:
A0A3G2TCI8
LinkDB
All DBs
Position
1386005..1387114
Genome browser
AA seq
369 aa
AA seq
DB search
MTTTEKDPVTALSPAKIVKIMKDPVKSARAVSLVYTTDRDMAGIIRRKSGKKFIYFDGDE
RIKDPEEIARINKLAIPPAWENVWICSLQNGHLQATGTDAKNRKQYRYHPVWNALRNHTK
FYRMLQFGYALPKMRLQLEKDLSLKTLEKRKVLAVVVSLMERTNIRIGNSVYEKLYGSFG
LTTLKDKHVAVTGQKINFSFKGKKGVYHDIDLKNRKLAKAVQNCKDIPGKELFQYYDADG
KRHTIDSGMVNDYIKEISGEDFTAKDFRTWSGTVNALIAFKEIGAAEEDSKYKSKVKEAL
EIVAANLGNTPTVCRKYYVHPLVINLYENNSIRKYLDELDEIEVDDGKSGLTKEEKIVMK
ILENEKLTK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagaaaaagatcccgtaaccgcgctttcacctgccaagatcgtgaaaatc
atgaaagacccggtgaaatccgcacgggccgtaagtctggtatatacgactgaccgcgat
atggcgggtatcatccgcaggaaaagtgggaagaaattcatttattttgatggagatgaa
agaataaaggatcctgaagaaatcgcacgtattaataaactcgcgattccacccgcatgg
gagaatgtatggatttgcagtctgcaaaacgggcatctacaagccaccggaacagacgcg
aaaaacagaaagcaataccgctatcacccagtctggaacgcgctgcgcaaccacaccaaa
ttctaccggatgcttcagtttggctatgcgttaccaaaaatgcgccttcagcttgaaaaa
gacctctctctaaaaaccctagagaaacgcaaagtccttgcagtggtcgtaagcttgatg
gagcggacaaatatccgtataggcaacagtgtgtacgaaaaactatatgggtcattcggg
cttaccacgcttaaagacaaacatgtcgcggttactggccagaaaatcaatttttcattt
aaaggaaaaaaaggggtgtatcacgatatcgaccttaaaaaccgaaaacttgcaaaagcg
gtacaaaactgtaaagacatcccggggaaggaactctttcaatattatgatgctgatggc
aagcgacacaccattgattcgggtatggtgaatgattacatcaaagaaatcagtggtgaa
gactttacggcaaaggacttccggacatggtctggcacggtaaacgctttaattgcattt
aaagaaataggtgccgcggaagaggattctaaatacaaatcgaaagtcaaggaagcgcta
gagatagtggctgcaaatcttggcaacacccctactgtttgccgcaaatattatgtacac
ccattggtgatcaacctttatgaaaacaattcgatacgaaaatatctagatgaacttgat
gaaattgaggtggatgacggcaaatccggacttaccaaagaggaaaaaatcgtaatgaag
atcctcgaaaacgaaaaattaaccaaataa
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