Chryseobacterium sp. 6424: CO230_07140
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Entry
CO230_07140 CDS
T05704
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
chrz
Chryseobacterium sp. 6424
Pathway
chrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CO230_07140 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrz03400
]
CO230_07140 (priA)
Enzymes [BR:
chrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO230_07140 (priA)
DNA repair and recombination proteins [BR:
chrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CO230_07140 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
DUF7129
RecA_N
IstB_IS21
SIR2
Motif
Other DBs
NCBI-ProteinID:
AYO58899
LinkDB
All DBs
Position
complement(1529085..1531463)
Genome browser
AA seq
792 aa
AA seq
DB search
MRAVLQPGMRVLVPFRGKKIYTGIVYEIHHREPENFVAKNLISLLDDYPILQPEQLQFWS
WLSSYYLCNLGEIYRFAFPSSLKLESETYLKLKPGAVVDFENLDVHEMYLIQALEVRQLI
NVTEAEAFIPKKELIKTIKSLIDLQYIEIDEKIAEKYKPREVAYLRLKDVEKLKKQLPEI
LLSLKRAPKQQGLLLSLLEKQTEHPDVPIKKSVVMDEKGFSYSQLNMLIGKNLVEEYTLQ
KDRIESYDGPVENLDQLTEAQLAAKYEIDEAFLAGKNVLLHGVTSSGKTHIYLDKIEEAI
NAGGSVLFLLPEIALTKQIVQRLEKKYGRQLGFYHQKLTDFERVEIWRRVRNNDLKVIVG
TRAALFLPFGQLRLVIVDEEHDSAYKPKEVSPFFNAKDAAQVFAGFFGARVILGSATPSV
ESYYAAQQDKLRYVFLNERFGGVRLPEYELINFKEEQDLKRVSGNFSLKLLDAFKTLLAD
KKQGMILHNRRGYSNVVECESCGYVNYCSNCDVVMTYHKVSNEMKCHYCGQRAAKPQTCP
KCHSENLNERGVGVEQIHEEISMIFPDAEIDRMDVDSMRKKFAFERLYEKIEDGETDMIV
GTQMISKGLDFDHIELVAIPKGDSLLYVQDFRAEERAYQLITQVAGRAGRTSGEGKVIIQ
TYQPEHSVFQLLKEQQSPRLYEHFLEERKKFLYPPFVKLILIELKHRREDKVNRSAQFLG
SILRKYLPEACVLGPEKSPIAKLNLLYQYQILLKLPRGKKYTYFKDLVEKSLDEFDEITA
YHSIKKLIFVDV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctgtgctacagcccggcatgcgcgtgcttgtaccattccgcggcaaaaagatt
tataccggcatcgtctacgaaatccaccatcgcgagccggagaatttcgtggcaaaaaac
ctcatcagcctgctggatgattatcctattcttcagccagagcagttgcagttctggtca
tggttgtcatcgtattatctttgtaacttaggggaaatttatcgttttgcctttccgtct
tcattaaaacttgaaagcgaaacgtatcttaaattaaaacctggcgccgtcgtggatttt
gaaaatctcgatgtgcacgagatgtacctcattcaggcacttgaggtgaggcaactcatc
aatgttaccgaagcagaagcttttatccctaaaaaagagcttataaaaaccatcaaatcg
ctgattgacctgcaatacattgagattgatgaaaaaattgccgaaaagtataaaccgcgc
gaagtcgcctatcttcgtttaaaagatgtagagaagcttaaaaaacagctgccggaaata
ctcctttccctgaaacgtgcaccaaaacagcagggtcttttactgtcactcctcgaaaaa
caaaccgaacatcctgatgtgccgattaaaaaatcggtggtgatggatgagaaaggattt
tcctattctcaactgaatatgctgatcggtaaaaatttggtagaagagtacacgctccag
aaagaccgtattgaaagttacgacggtcctgtagaaaacctcgaccagctgacggaagcg
caacttgcggcaaaatacgaaatagatgaggcttttttagctggtaaaaatgtactctta
catggcgttacctcatcggggaaaacgcatatttaccttgataagattgaggaggcgata
aacgctggtggtagcgtgctgtttctgttgccggagattgcgcttaccaagcagattgta
cagcgacttgaaaagaagtatggccggcaattaggcttttatcatcagaaacttacggat
tttgaacgtgtggaaatctggcgacgggtacgcaacaatgacctgaaggtgattgtcggt
acacgggcagcacttttcctgccattcggacagttgcggttggtgatcgtagatgaagag
catgattcggcatacaaacctaaggaagtgtcgccattctttaatgcaaaagatgcggcg
caggtgttcgctggttttttcggggcacgcgttatcttaggttcggccacaccttcggta
gaatcttattatgccgcacagcaagataaactcaggtatgtgttccttaacgaacgtttc
ggcggtgtgcggctgccggaatatgaattaatcaacttcaaggaagagcaggatcttaaa
agggtatcgggtaatttttcactcaagttgctcgatgctttcaaaaccttgcttgccgat
aagaagcagggtatgattctccacaaccgccgtggctactcgaatgtagtggaatgtgaa
agttgcggttatgtaaattactgctcgaactgtgatgtggtaatgacttaccataaagtt
tcaaacgaaatgaaatgccactactgcgggcagcgcgcggcaaagccacaaacgtgtccg
aaatgccattctgaaaacctgaatgagcgtggcgttggtgtagaacagatccatgaagaa
atttcaatgatttttccggatgcggagatcgaccggatggatgtggacagtatgcgaaag
aaatttgcgttcgaaaggctgtatgagaaaatagaagacggtgaaaccgatatgattgtc
ggtacacagatgatttctaaaggattggatttcgatcatatcgagctggtagcgatacca
aaaggcgactccttgttgtatgtgcaggattttcgtgcggaagaacgcgcttatcaactc
attacgcaggtcgccggcagggcaggccgcacatctggtgaaggcaaagtcatcatacag
acatatcaacccgagcattcggtttttcagttgttgaaagagcagcagagcccacgtctt
tacgaacattttctggaagaaaggaagaaatttctgtatccaccgtttgtaaaactcatc
ctgattgaactgaagcaccgccgtgaggacaaagtgaaccgttcagcacagtttttgggt
tcaatcttacggaaatatctaccggaagcctgtgtcttaggcccggaaaaatcgccgata
gccaaactgaacctattatatcaatatcaaattctcctgaaattgccccgtggaaaaaaa
tacacttacttcaaggatttagtggaaaaaagtcttgatgaatttgatgagattaccgcg
tatcacagtatcaagaaactgatatttgtagatgtttaa
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