Chryseobacterium sp. 6424: CO230_08235
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Entry
CO230_08235 CDS
T05704
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
chrz
Chryseobacterium sp. 6424
Pathway
chrz02024
Quorum sensing
chrz03060
Protein export
chrz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CO230_08235
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CO230_08235
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CO230_08235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
chrz02044
]
CO230_08235
Secretion system [BR:
chrz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CO230_08235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
AYO58109
LinkDB
All DBs
Position
complement(1778138..1781050)
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AA seq
970 aa
AA seq
DB search
MQGKGLITLVAVILGLICLNELLPTWYASKLEKQATEIAGDNPEKYQKELARLSKDTLNL
GFTKLYYSKSKEKEMKLGLDLKGGINVLLEINQRDLVNNLTNYSTNPVLIEALDRTDQQQ
KNSTNTYIKDFFTQFEQVNKEKGTNLKLADPEIFGNTNLSEIKFNTPDDKVRNIIENRIE
LSTGTAYEVIRTRIDKMGVTQPNVQRVPRTGRISVEMPGVKDIDRVKKMLQTSAKLQFWE
VQQVQEVLPYFEQLNTIVNAKADSIGVPANTNLVALMQLGTLRSNGVANVKLSDTAVVNK
ILNSEAAKNLRPQNLKYSQFMWGYKPEVNDPNNLVLYAIRGNINQKAPVDGAVESARVNY
DDLGRIVVDMQMDSKGSKDWKTLTSRNVNKPVAVTLDNVVYTAPNVVNEIPNGRTQISGS
FSQEEAQDLVNVLGAGKLPAGAKIVQAEVVGPSLGAESVQAGMYSFIIAFVIIILYMLFY
YGGAGVYAIIAISINLFYLLGIMDSVDATLTLPGIAGIVLSMAMSIDANVIVYERTKEEL
FAGKNIREAYNEGFKFSLSAIIDGNITSLLTAIVLYIFGTGPIQGFAVTLGIGILLSMFT
CVVLTRVLIFSRLEKGKSLSVWTKFSKNIFRNTWINFIGKRKLAYIFSGIITLICLASIF
TSGFKYGVDFKGGRSYVVRFANPVVADEAAESLEKQFVNKEGQKNAVDVKTFGSSDQLKI
TTDYRVDEESLEADLDVENKLFTGLQPYLPEDAQISGFKDSGASNYGIVSSVKVGPTVAD
DIKSGGAIAMLIALAGIFLYILVRFKKWQFSTGAIASLVHDAIVILGVYSLLKNVMPFNM
EINQDFIAAILTVLGYSINDTVIIFDRIREYLAEKKSLTLEGLFNDSISSTLGRTFNTAF
MTFLVILAIFIFGGENLRGFMFALLIGVGFGTYSTWFIASAVSYDLLKKKNPAGTSNKLA
ADKVTEDKRK
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaaaggacttattacgctggttgcagtcattcttgggcttatttgccttaac
gaattgttgcctacctggtatgccagcaagttggagaagcaggccactgaaatagccggt
gataatccggagaaataccagaaagaactggccagactttcaaaagacaccctgaatctc
ggttttacaaaactatattactcaaagtccaaagagaaagagatgaaacttgggctagac
cttaaaggcggcatcaacgttctattggaaattaaccagagagatttggtgaacaacctt
accaattactccaccaaccctgtactcatcgaggcattggacaggacagatcagcaacag
aaaaactctaccaatacttacattaaagatttctttacccaattcgagcaggtaaataaa
gaaaagggaaccaacctgaaacttgccgaccctgaaatcttcgggaataccaacctttct
gaaatcaaattcaacacacccgacgataaagttaggaatatcatagaaaaccgcatcgaa
ctttctacaggtaccgcctatgaagtcatccgtacacgtatcgataaaatgggcgttacc
caaccaaacgttcagcgtgtaccacgtaccggacgtatctccgtagaaatgccaggcgta
aaagatatcgaccgcgtgaagaaaatgcttcagacttctgccaaacttcagttctgggaa
gtacagcaggttcaggaagtattaccttattttgagcagttaaacacgatcgttaacgca
aaagcggattctatcggggtgcctgccaatacaaacttggtagcgctgatgcaattgggt
acgctgaggtctaatggtgtagccaatgtaaaactttctgatacagcggttgtaaataaa
atcctcaacagcgaagctgcgaaaaatttaagaccacaaaacttgaaatattctcaattt
atgtggggatataagccggaagtcaacgatccgaataatttggtgctgtatgccatccgt
ggcaatatcaaccagaaagcaccagtagatggcgctgtagaatctgcaagggtaaattat
gatgaccttggtagaattgtggtggatatgcagatggactccaaaggatccaaagactgg
aaaacgcttaccagtcgcaatgtaaacaaaccagtagcggtaacgcttgataatgtggta
tataccgcaccgaatgtcgtaaatgaaatcccgaacgggcgtacccaaatctcgggcagt
ttctcacaggaagaagcgcaggatttggtaaacgtactgggagcgggtaaattgccagcc
ggtgcgaagatcgttcaggctgaggtcgttgggccatcgctgggcgcagaatctgtacag
gccggtatgtattccttcatcatcgcgtttgtaatcattattttatacatgttgttctat
tacggcggagccggtgtttacgccatcatcgccattagtatcaaccttttctatctgcta
ggaatcatggactcggtggatgctacgcttacattgcctggtattgcgggtatcgtatta
tctatggcgatgtctattgatgccaacgtaattgtatatgaacgaaccaaggaagaactc
ttcgctggtaaaaacatccgcgaggcgtataacgaaggcttcaaattctcgctttcagcg
attattgatggtaacattacctccttgcttactgccattgtactgtatattttcggtacc
gggcctattcagggctttgctgtaacattgggtatcggtatcctgctttcgatgttcacg
tgtgtggtattgaccagagtattgatcttcagcagactcgagaaagggaaatccctgtca
gtttggacgaaatttagtaagaatattttcagaaatacttggattaactttatcggcaaa
agaaaacttgcttatattttctctgggattattaccttaatctgtcttgcatccattttt
acttcaggttttaaatatggggtagactttaaaggaggccgaagctatgtcgtacgtttt
gcaaatccggttgtagccgatgaagctgcggagagtttggaaaagcagttcgtaaataaa
gaaggacaaaaaaatgcagttgatgtaaagactttcggaagcagcgaccagttgaaaatt
acaaccgattacagggttgatgaagaaagccttgaagcagatttggatgttgagaacaaa
ctcttcacaggcctacagccatatcttccggaggacgcgcagattagcgggtttaaagat
tctggtgccagcaattatggtattgtaagttctgtaaaagtaggaccaaccgtggctgat
gatattaagagtggtggtgcaatcgccatgctgatcgcgttggcggggatcttcctttac
atccttgtacgtttcaagaaatggcagttctctaccggggcaatcgcttcactggtgcac
gatgctatcgtaattcttggggtttattcactcctgaaaaacgtgatgccgtttaatatg
gagatcaatcaggattttattgcggcgattcttacggttcttggttattcaattaatgat
actgtaattattttcgaccgcatccgtgaatatttagccgagaaaaaatcacttactctt
gaaggattgtttaatgattccatctccagtaccttgggaagaacctttaacacagctttc
atgaccttccttgtaattttggccatctttattttcggtggggaaaatcttcggggcttt
atgtttgcgctcctgattggggtaggcttcggtacctattctacctggttcattgcatct
gcggtttcgtatgacttgctgaagaagaaaaatcctgcaggtacatcgaataaactggca
gcagataaggtgacagaagataaaagaaaataa
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