Chryseobacterium sp. 6424: CO230_09850
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Entry
CO230_09850 CDS
T05704
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
chrz
Chryseobacterium sp. 6424
Pathway
chrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CO230_09850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrz03400
]
CO230_09850
Enzymes [BR:
chrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO230_09850
DNA repair and recombination proteins [BR:
chrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CO230_09850
RecFOR pathway proteins
CO230_09850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
TIP49
AAA_22
AAA_16
Rad17
AAA_14
TsaE
nSTAND3
NTPase_1
Bac_DnaA
NB-ARC
RNA_helicase
Sigma54_activ_2
NACHT
AAA_33
AAA_18
AAA_24
NPHP3_N
AAA_PrkA
AAA_28
ABC_tran
IstB_IS21
AAA_17
bpMoxR
DUF815
Parvo_NS1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AYO58397
UniProt:
A0A3G2TEH2
LinkDB
All DBs
Position
complement(2107243..2108265)
Genome browser
AA seq
340 aa
AA seq
DB search
MPDFLHPDKGNFSDDELLHEEKIRPQSFQDFAGQRKTLDNLQVFVAAAKNRGSALDHVLL
HGPPGLGKTTLAHIIANELGVNCKITSGPVLDKPGSLAGLLTNLEENDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMLETGPNARSVQIGLNPFTLVGATTRSGMLTKPMLARFGIQSR
LEYYTVELLGMIIERSARVLGVKIYEDAALEIARRSRGTPRIANALLRRVRDFAEIKGNG
EIEIGITKFALNSLNVDEFGLDDMDNRIMRVMIENFKGKPVGISALATSIGENPETLEEV
YEPFLIQEGFIIRTPRGREVTEKAYRHLNINSPKRPDTLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattttttacatccggataagggtaacttttctgatgatgaactgctgcacgag
gagaaaatccggccccaaagttttcaggattttgccgggcaacgtaagactttggataat
ctgcaggttttcgtagcggccgccaaaaaccgtggcagcgcgttagatcatgtgctgtta
catggtccgccaggtcttggtaaaaccaccttggcgcatatcatcgctaatgaattgggt
gtgaactgcaaaattacctcggggccagtgctcgataagcctggcagcctcgccggttta
ctgaccaatctggaggagaatgatgtgctgtttattgatgagatccaccggctttcgccc
attgtagaggaatatctatattcggcgatggaagattataaaatcgatattatgctggaa
accgggccaaacgcacgttcggtacaaatcggtctcaatccctttacgttggttggggcg
accacacgttccgggatgctgacgaagccgatgctggccagattcgggatacagtctaga
ttagaatattataccgtagaactgcttgggatgattattgaaagaagcgcaagggttttg
ggagtgaagatttacgaagatgccgccctggaaattgccagaagaagccgcggaaccccc
cggattgccaacgcgttattaagaagggttcgggattttgcggaaatcaaaggaaatggc
gaaattgaaataggtatcaccaaattcgcgctgaactctcttaacgtggatgagtttggg
ctggatgatatggataaccggatcatgcgggtgatgattgaaaatttcaaggggaaacct
gtcgggatttcagctttggcaacatccattggtgaaaacccggaaactttagaagaagtt
tatgaaccttttttaattcaggaaggattcatcatccggacaccgcgcggccgtgaagtc
accgaaaaagcctatagacatttaaacatcaatagtccgaaaagaccggatacacttttt
taa
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